RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 AGPAT1Q99943 283 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 PACSIN1Q9BY11 444 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 INHBAP08476 426 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 HNRNPH1P31943 449 aaKnown RBP13.14□□□□□ -0.31
COLCA1-201ENST00000355430 MSH2P43246 934 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 OSTNP61366 133 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 NBPF9Q3BBW0 867 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 GJB7Q6PEY0 223 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 BBS5Q8N3I7 341 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 SLC9A2Q9UBY0 812 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 AKAP12Q02952 1782 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 SLC16A3O15427 465 aaKnown RBP13.13□□□□□ -0.31
COLCA1-201ENST00000355430 NDUFB10O96000 172 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 DRP2Q13474 957 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 MAP7D1Q3KQU3 841 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 KIAA1755Q5JYT7 1200 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 CHADLQ6NUI6 762 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 XXYLT1Q8NBI6 393 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.13□□□□□ -0.31
COLCA1-201ENST00000355430 HDAC7Q8WUI4 952 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 SYN2Q92777 582 aaPredicted RBP13.13□□□□□ -0.31
COLCA1-201ENST00000355430 ZDHHC15Q96MV8 337 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 EMSYQ7Z589 1322 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 A0A087X0T9 212 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 RASA4BC9J798 803 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 H7C0C1 242 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 RASA4O43374 803 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 EVI5O60447 810 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 FAM228BP0C875 321 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 ATP5OP48047 213 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 RCN2Q14257 317 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 LRRD1A4D1F6 860 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 DCDC2CA8MYV0 355 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 FIGNQ5HY92 759 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 AGBL2Q5U5Z8 902 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 TTLL3Q9Y4R7 772 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 SLC16A4O15374 487 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 EYA4O95677 639 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 PRLRP16471 622 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 PSMC4P43686 418 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 SWSAP1Q6NVH7 229 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 DNAJC24Q6P3W2 148 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 EPM2AIP1Q7L775 607 aaPredicted RBP13.13□□□□□ -0.31
COLCA1-201ENST00000355430 SPATA24Q86W54 205 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 GBP7Q8N8V2 638 aaPredicted RBP13.13□□□□□ -0.31
COLCA1-201ENST00000355430 CCHCR1Q8TD31 782 aa13.13□□□□□ -0.31
COLCA1-201ENST00000355430 P4HBP07237 508 aaKnown RBP13.12□□□□□ -0.31
COLCA1-201ENST00000355430 BRAFP15056 766 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 ZKSCAN4Q969J2 545 aaPredicted RBP13.12□□□□□ -0.31
COLCA1-201ENST00000355430 OPTNQ96CV9 577 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 TGS1Q96RS0 853 aaKnown RBP13.12□□□□□ -0.31
COLCA1-201ENST00000355430 WNT8AQ9H1J5 351 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 MAPK13O15264 365 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 TSPY1Q01534 308 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 KLHDC7AQ5VTJ3 777 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 PASD1Q8IV76 773 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 KCNV2Q8TDN2 545 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 PRMT6Q96LA8 375 aaPredicted RBP13.12□□□□□ -0.31
COLCA1-201ENST00000355430 GABBR1Q9UBS5 961 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 FAM107AO95990 144 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 PSMC5P62195 406 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 BAATQ14032 418 aaPredicted RBP13.12□□□□□ -0.31
COLCA1-201ENST00000355430 DEFB115Q30KQ5 88 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 EDRF1Q3B7T1 1238 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 IER5Q5VY09 327 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 TMEM139Q8IV31 216 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 XPO6Q96QU8 1125 aaKnown RBP13.12□□□□□ -0.31
COLCA1-201ENST00000355430 STK33Q9BYT3 514 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 VCX3BQ9H321 246 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 IFT122Q9HBG6 1241 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 LRRC4Q9HBW1 653 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 SCAF8Q9UPN6 1271 aaKnown RBP13.12□□□□□ -0.31
COLCA1-201ENST00000355430 MAD1L1Q9Y6D9 718 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 KRT10P13645 584 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 INHBEP58166 350 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 BYSLQ13895 437 aaKnown RBP13.12□□□□□ -0.31
COLCA1-201ENST00000355430 SCFD2Q8WU76 684 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 DUSP9Q99956 384 aaKnown RBP13.12□□□□□ -0.31
COLCA1-201ENST00000355430 SMARCAD1Q9H4L7 1026 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 JMJD4Q9H9V9 463 aa13.12□□□□□ -0.31
COLCA1-201ENST00000355430 SMIM22K7EJ46 135 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 MED7O43513 233 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 CD58P19256 250 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 QARSP47897 775 aaKnown RBP13.11□□□□□ -0.31
COLCA1-201ENST00000355430 BASP1P80723 227 aaKnown RBP13.11□□□□□ -0.31
COLCA1-201ENST00000355430 VGLL2Q8N8G2 317 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 GLIS2Q9BZE0 524 aaPredicted RBP13.11□□□□□ -0.31
COLCA1-201ENST00000355430 JPH1Q9HDC5 661 aaPredicted RBP13.11□□□□□ -0.31
COLCA1-201ENST00000355430 RNF8O76064 485 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 GLI1P08151 1106 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 CAP2P40123 477 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 KRT17Q04695 432 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 GNASQ5JWF2 1037 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 HP1BP3Q5SSJ5 553 aaPredicted RBP13.11□□□□□ -0.31
COLCA1-201ENST00000355430 PPP1R2P3Q6NXS1 205 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 RHPN2Q8IUC4 686 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 KIAA0895Q8NCT3 520 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 BEST2Q8NFU1 509 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 MROH8Q9H579 483 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 DBR1Q9UK59 544 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms