RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 ATP11AP98196 1134 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 NYAP1Q6ZVC0 841 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 EIF3CQ99613 913 aaKnown RBP13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 NUP85Q9BW27 656 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 DAAM1Q9Y4D1 1078 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 A6NJR5 290 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 H3BRB1 525 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 HUS1O60921 280 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 VIMP08670 466 aaKnown RBP13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 ATP2A2P16615 1042 aaKnown RBP13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 PSMA2P25787 234 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 PLA2G4AP47712 749 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 GALCP54803 685 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 PPATQ06203 517 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 ARMCX2Q7L311 632 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 SIX6OS1Q8N1H7 587 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 TNFRSF25Q93038 417 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 MS4A14Q96JA4 679 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 DUSP9Q99956 384 aaKnown RBP13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 MROH8Q9H579 483 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 TUT1Q9H6E5 874 aaKnown RBP13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 FAM49BQ9NUQ9 324 aa13.22□□□□□ -0.29
PCDHB11-201ENST00000354757 A0A087X0T9 212 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 GOLGA6L7A0A1B0GV03 622 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 GRAP2O75791 330 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 FAM228BP0C875 321 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 GPC5P78333 572 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 DGKDQ16760 1214 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 SLC35G1Q2M3R5 365 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 PAN2Q504Q3 1202 aaKnown RBP13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 XRRA1Q6P2D8 792 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 ANKRD42Q8N9B4 389 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 CCDC97Q96F63 343 aaPredicted RBP13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 ZBTB45Q96K62 511 aaPredicted RBP13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 A0A087WZ62 844 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 F5H423 210 aaPredicted RBP13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 INSRRP14616 1297 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 ABCD1P33897 745 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 SLCO1A2P46721 670 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 LAMC2Q13753 1193 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 VSIG10LQ86VR7 867 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 ZNF564Q8TBZ8 553 aaPredicted RBP13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 FDXACB1Q9BRP7 624 aaPredicted RBP13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 UBE4BO95155 1302 aa13.21□□□□□ -0.29
PCDHB11-201ENST00000354757 PPP2R5CQ13362 524 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 SPOPLQ6IQ16 392 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 KCND2Q9NZV8 630 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 MAD1L1Q9Y6D9 718 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 KLRG2A4D1S0 409 aaPredicted RBP13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 PI4K2BG5E9Z4 385 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 FOXN3O00409 490 aaPredicted RBP13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 NDUFAB1O14561 156 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 MED7O43513 233 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 TRPA1O75762 1119 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 NOP14P78316 857 aaKnown RBP13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 ITKQ08881 620 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 KIAA1755Q5JYT7 1200 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 ICE2Q659A1 982 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 DENND2CQ68D51 928 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 USP50Q70EL3 339 aaPredicted RBP13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 METTL23Q86XA0 190 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 TEX2Q8IWB9 1127 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 UPF1Q92900 1129 aaKnown RBP eCLIP13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 CPB2Q96IY4 423 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 OSMRQ99650 979 aa13.21□□□□□ -0.3
PCDHB11-201ENST00000354757 SNHG28P0DPA3 235 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 PSMC1P62191 440 aaKnown RBP13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 MDM2Q00987 491 aaPredicted RBP13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 NPY5RQ15761 445 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 SLC18A3Q16572 532 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 KLHDC7AQ5VTJ3 777 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 CDKAL1Q5VV42 579 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 TRIM65Q6PJ69 517 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 METTL7BQ6UX53 244 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 CCDC117Q8IWD4 279 aaPredicted RBP13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 KCTD6Q8NC69 237 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 BEST2Q8NFU1 509 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 TAS1R2Q8TE23 839 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 DHX38Q92620 1227 aaKnown RBP13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 TSNARE1Q96NA8 513 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 MYCBPQ99417 103 aaPredicted RBP13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 PRDM5Q9NQX1 630 aaPredicted RBP13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 EHD2Q9NZN4 543 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 NFU1Q9UMS0 254 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 POLIQ9UNA4 740 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 TCHHQ07283 1943 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 CCDC151A5D8V7 595 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 CCT5P48643 541 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 SMAD1Q15797 465 aaKnown RBP13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 IER5Q5VY09 327 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 SLC5A5Q92911 643 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 WNK4Q96J92 1243 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 AGPAT1Q99943 283 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 MTMR12Q9C0I1 747 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 LACRTQ9GZZ8 138 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 KCNMB3Q9NPA1 279 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 TTC7AQ9ULT0 858 aaPredicted RBP13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 SNX24Q9Y343 169 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 DOT1LQ8TEK3 1739 aa13.2□□□□□ -0.3
PCDHB11-201ENST00000354757 TRPM3Q9HCF6 1732 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms