RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 ADNPQ9H2P0 1102 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 HAUS4Q9H6D7 363 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 JRKLQ9Y4A0 524 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 MAN1A2O60476 641 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 HSPA1AP0DMV8 641 aaKnown RBP10.58□□□□□ -0.72
COL11A1-201ENST00000353414 HSPA1BP0DMV9 641 aaKnown RBP10.58□□□□□ -0.72
COL11A1-201ENST00000353414 ALDH18A1P54886 795 aaKnown RBP10.58□□□□□ -0.72
COL11A1-201ENST00000353414 SDE2Q6IQ49 451 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 ZNF614Q8N883 585 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 APOBEC2Q9Y235 224 aaKnown RBP10.58□□□□□ -0.72
COL11A1-201ENST00000353414 PALLDQ8WX93 1383 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 RNF103-CHMP3A0A140T963 221 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 TXNP10599 105 aaKnown RBP10.58□□□□□ -0.72
COL11A1-201ENST00000353414 ALDH6A1Q02252 535 aaKnown RBP10.58□□□□□ -0.72
COL11A1-201ENST00000353414 TNFAIP2Q03169 654 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 LRRC36Q1X8D7 754 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 TMEM179Q6ZVK1 233 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 PODNQ7Z5L7 613 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 RAB42Q8N4Z0 105 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 ZNF280CQ8ND82 737 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 CPA5Q8WXQ8 436 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 MED4Q9NPJ6 270 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 RBAKQ9NYW8 714 aaPredicted RBP10.58□□□□□ -0.72
COL11A1-201ENST00000353414 TCN1P20061 433 aaPredicted RBP10.58□□□□□ -0.72
COL11A1-201ENST00000353414 DNAJB2P25686 324 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 PDAP1Q13442 181 aaKnown RBP10.58□□□□□ -0.72
COL11A1-201ENST00000353414 PITPNM3Q9BZ71 974 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 MAN1C1Q9NR34 630 aa10.58□□□□□ -0.72
COL11A1-201ENST00000353414 KRT87PA6NCN2 255 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 CCDC85CA6NKD9 419 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 GUCA1CO95843 209 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 HSPA8P11142 646 aaKnown RBP10.57□□□□□ -0.72
COL11A1-201ENST00000353414 SMARCA1P28370 1054 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 HMOX2P30519 316 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 IL6STP40189 918 aaPredicted RBP10.57□□□□□ -0.72
COL11A1-201ENST00000353414 VAMP7P51809 220 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 UBE3CQ15386 1083 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 EFHC2Q5JST6 749 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 SLC44A2Q8IWA5 706 aaPredicted RBP10.57□□□□□ -0.72
COL11A1-201ENST00000353414 SYT2Q8N9I0 419 aaPredicted RBP10.57□□□□□ -0.72
COL11A1-201ENST00000353414 SCOCQ9UIL1 159 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 PKP3Q9Y446 797 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 CELF2O95319 508 aaKnown RBP10.57□□□□□ -0.72
COL11A1-201ENST00000353414 NUDT18Q6ZVK8 323 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 ACAP3Q96P50 834 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 ASPSCR1Q9BZE9 553 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 USE1Q9NZ43 259 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 MKL2Q9ULH7 1088 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 A6NNZ2 444 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 MCAMP43121 646 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 CDH6P55285 790 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 TUBB8Q3ZCM7 444 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 BZW1Q7L1Q6 419 aaKnown RBP10.57□□□□□ -0.72
COL11A1-201ENST00000353414 FAM161BQ96MY7 647 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 MRPL4Q9BYD3 311 aaKnown RBP10.57□□□□□ -0.72
COL11A1-201ENST00000353414 COA1Q9GZY4 146 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 NDST4Q9H3R1 872 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 YY1AP1Q9H869 796 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 ITIH6Q6UXX5 1313 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 LAD1O00515 517 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 MAPK13O15264 365 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 LARGE1O95461 756 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 PRR29P0C7W0 189 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 PDIA2Q13087 525 aaKnown RBP10.57□□□□□ -0.72
COL11A1-201ENST00000353414 TOGARAM2Q6ZUX3 1019 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 CYB5R4Q7L1T6 521 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 ZBED8Q8IZ13 594 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 IQCDQ96DY2 449 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 LXNQ9BS40 222 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 FAM49BQ9NUQ9 324 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 PCDHGB4Q9UN71 923 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 N6AMT1Q9Y5N5 214 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 KDM5CP41229 1560 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 C5orf58C9J3I9 102 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 MAP3K13O43283 966 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 TRIM49P0CI25 452 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 TRIM49CP0CI26 452 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 TPI1P60174 286 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 RPS6P62753 249 aaKnown RBP10.57□□□□□ -0.72
COL11A1-201ENST00000353414 GABPB1Q06547 395 aaPredicted RBP10.57□□□□□ -0.72
COL11A1-201ENST00000353414 EZH2Q15910 746 aaKnown RBP10.57□□□□□ -0.72
COL11A1-201ENST00000353414 TMC4Q7Z404 712 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 FBXO18Q8NFZ0 1043 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 JADE3Q92613 823 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 INPP5DQ92835 1189 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 TMA16Q96EY4 203 aaKnown RBP10.57□□□□□ -0.72
COL11A1-201ENST00000353414 RNF26Q9BY78 433 aaPredicted RBP10.57□□□□□ -0.72
COL11A1-201ENST00000353414 TRIM54Q9BYV2 358 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 ZNF711Q9Y462 761 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 JAK3P52333 1124 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 HSP90AA5PQ58FG0 334 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 MEI1Q5TIA1 1274 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 NSUN7Q8NE18 718 aaKnown RBP10.57□□□□□ -0.72
COL11A1-201ENST00000353414 OXER1Q8TDS5 423 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 KAT2BQ92831 832 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 BTBD6Q96KE9 485 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 AK8Q96MA6 479 aa10.57□□□□□ -0.72
COL11A1-201ENST00000353414 TRIM45Q9H8W5 580 aaPredicted RBP10.57□□□□□ -0.72
COL11A1-201ENST00000353414 SDC4P31431 198 aa10.56□□□□□ -0.72
COL11A1-201ENST00000353414 AVPR1AP37288 418 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms