RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 C17orf53Q8N3J3 647 aaPredicted RBP9.07□□□□□ -0.96
CD44-205ENST00000352818 TDRD5Q8NAT2 981 aaKnown RBP9.07□□□□□ -0.96
CD44-205ENST00000352818 ANKRD20A12PQ8NF67 263 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 ETNPPLQ8TBG4 499 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 SNX29Q8TEQ0 813 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 SCFD2Q8WU76 684 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 NELFBQ8WX92 580 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 LINC01599Q8WXQ3 324 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 LARP4BQ92615 738 aaKnown RBP9.07□□□□□ -0.96
CD44-205ENST00000352818 RAD54LQ92698 747 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 STAMQ92783 540 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 CDK5RAP3Q96JB5 506 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 FAM20AQ96MK3 541 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 CDCA3Q99618 268 aaPredicted RBP9.07□□□□□ -0.96
CD44-205ENST00000352818 EPC1Q9H2F5 836 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 SAMSN1Q9NSI8 373 aaKnown RBP9.07□□□□□ -0.96
CD44-205ENST00000352818 EXOC1Q9NV70 894 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 CTDP1Q9Y5B0 961 aaPredicted RBP9.07□□□□□ -0.96
CD44-205ENST00000352818 LOXHD1Q8IVV2 1947 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 MYO18BQ8IUG5 2567 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 BICDL2A1A5D9 508 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 SPDYE3A6NKU9 549 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 HIDE1A8MVS5 230 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 NFIBO00712 420 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 ENPP3O14638 875 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 TM4SF5O14894 197 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 SPTLC1O15269 473 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 GDF9O60383 454 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 LILRB5O75023 590 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 HOXB8P17481 243 aaPredicted RBP9.06□□□□□ -0.96
CD44-205ENST00000352818 CCNE1P24864 410 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 EEF1GP26641 437 aaKnown RBP9.06□□□□□ -0.96
CD44-205ENST00000352818 HOXC8P31273 242 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 PRCPP42785 496 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 GATMP50440 423 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 ASIC1P78348 528 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 GHRHRQ02643 423 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 IKQ13123 557 aaPredicted RBP9.06□□□□□ -0.96
CD44-205ENST00000352818 PSMD2Q13200 908 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 TDGQ13569 410 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 TRIM14Q14142 442 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 TPD52L1Q16890 204 aaPredicted RBP9.06□□□□□ -0.96
CD44-205ENST00000352818 KIAA0753Q2KHM9 967 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 TKFCQ3LXA3 575 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 KLHL10Q6JEL2 608 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 NYAP1Q6ZVC0 841 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 SMYD4Q8IYR2 804 aaPredicted RBP9.06□□□□□ -0.96
CD44-205ENST00000352818 CCAR2Q8N163 923 aaKnown RBP9.06□□□□□ -0.96
CD44-205ENST00000352818 SAMD3Q8N6K7 520 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 ZBTB44Q8NCP5 570 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 NELL1Q92832 810 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 LENG9Q96B70 501 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 EHMT1Q9H9B1 1298 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 TBC1D17Q9HA65 648 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 FBXL21Q9UKT6 434 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 PNMA2Q9UL42 364 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 PCDHA12Q9UN75 941 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 WASF3Q9UPY6 502 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 GDAQ9Y2T3 454 aa9.06□□□□□ -0.96
CD44-205ENST00000352818 MRPL11Q9Y3B7 192 aaKnown RBP9.06□□□□□ -0.96
CD44-205ENST00000352818 R3HCC1Q9Y3T6 440 aaKnown RBP9.06□□□□□ -0.96
CD44-205ENST00000352818 MYMKA6NI61 221 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 EOMESO95936 686 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 FECHP22830 423 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 STX17P56962 302 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 PDE4DQ08499 809 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 SPIRE1Q08AE8 756 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 KRT31Q15323 416 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 LY6KQ17RY6 165 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 ZNF528Q3MIS6 628 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 TCP11X2Q5H9J9 407 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 DNTTIP2Q5QJE6 756 aaKnown RBP9.05□□□□□ -0.96
CD44-205ENST00000352818 HAUS3Q68CZ6 603 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 TTI2Q6NXR4 508 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 SLC30A10Q6XR72 485 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 TMEM139Q8IV31 216 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 FAM114A1Q8IWE2 563 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 CMTR2Q8IYT2 770 aaKnown RBP9.05□□□□□ -0.96
CD44-205ENST00000352818 GUF1Q8N442 669 aaKnown RBP9.05□□□□□ -0.96
CD44-205ENST00000352818 ERMNQ8TAM6 284 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 MICAL1Q8TDZ2 1067 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 CCDC51Q96ER9 411 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 NECTIN4Q96NY8 510 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 BBC3Q96PG8 261 aaPredicted RBP9.05□□□□□ -0.96
CD44-205ENST00000352818 KCNK12Q9HB15 430 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 HCSTQ9UBK5 93 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 USTQ9Y2C2 406 aa9.05□□□□□ -0.96
CD44-205ENST00000352818 KIAA1671Q9BY89 1806 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 LOC102724159A0A0B4J2E5 919 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 A0A1W2PQC6 194 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 FRMD3A2A2Y4 597 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 KCNJ18B7U540 433 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 GCOM1H8Y6P7 765 aaPredicted RBP9.04□□□□□ -0.96
CD44-205ENST00000352818 ARHGAP6O43182 974 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 STX10O60499 249 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 ICAM1P05362 532 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 CFHP08603 1231 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 POLR2MP0CAP2 368 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 FDX1P10109 184 aa9.04□□□□□ -0.96
CD44-205ENST00000352818 MUTP22033 750 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms