RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 MXRA8Q9BRK3 442 aa26.36■■□□□ 1.81
CPNE1-202ENST00000352393 HERC5Q9UII4 1024 aaKnown RBP26.36■■□□□ 1.81
CPNE1-202ENST00000352393 MTUS1Q9ULD2 1270 aa26.36■■□□□ 1.81
CPNE1-202ENST00000352393 CCT8L1PA6NM43 557 aa26.35■■□□□ 1.81
CPNE1-202ENST00000352393 ITIH4Q14624 930 aa26.35■■□□□ 1.81
CPNE1-202ENST00000352393 ZSWIM2Q8NEG5 633 aa26.35■■□□□ 1.81
CPNE1-202ENST00000352393 ZNF564Q8TBZ8 553 aaPredicted RBP26.35■■□□□ 1.81
CPNE1-202ENST00000352393 TMEM117Q9H0C3 514 aa26.35■■□□□ 1.81
CPNE1-202ENST00000352393 PASKQ96RG2 1323 aa26.35■■□□□ 1.81
CPNE1-202ENST00000352393 RARAP10276 462 aa26.35■■□□□ 1.81
CPNE1-202ENST00000352393 FMO1Q01740 532 aa26.35■■□□□ 1.81
CPNE1-202ENST00000352393 MFSD5Q6N075 450 aa26.35■■□□□ 1.81
CPNE1-202ENST00000352393 MAEAQ7L5Y9 396 aa26.35■■□□□ 1.81
CPNE1-202ENST00000352393 PARP9Q8IXQ6 854 aa26.35■■□□□ 1.81
CPNE1-202ENST00000352393 NUP85Q9BW27 656 aa26.35■■□□□ 1.81
CPNE1-202ENST00000352393 STMN4Q9H169 189 aaPredicted RBP26.35■■□□□ 1.81
CPNE1-202ENST00000352393 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.35■■□□□ 1.819e-8■■■■■ 116.8
CPNE1-202ENST00000352393 INTS9Q9NV88 658 aaKnown RBP26.35■■□□□ 1.81
CPNE1-202ENST00000352393 GEMIN8Q9NWZ8 242 aaKnown RBP26.35■■□□□ 1.81
CPNE1-202ENST00000352393 DDX39AO00148 427 aaKnown RBP26.34■■□□□ 1.81
CPNE1-202ENST00000352393 PLS3P13797 630 aa26.34■■□□□ 1.81
CPNE1-202ENST00000352393 MCCD1P59942 119 aaPredicted RBP26.34■■□□□ 1.81
CPNE1-202ENST00000352393 AUHQ13825 339 aaKnown RBP26.34■■□□□ 1.81
CPNE1-202ENST00000352393 RASA3Q14644 834 aa26.34■■□□□ 1.81
CPNE1-202ENST00000352393 ZNF568Q3ZCX4 644 aa26.34■■□□□ 1.81
CPNE1-202ENST00000352393 MIER3Q7Z3K6 550 aa26.34■■□□□ 1.81
CPNE1-202ENST00000352393 CCDC105Q8IYK2 499 aa26.34■■□□□ 1.81
CPNE1-202ENST00000352393 LRRC34Q8IZ02 419 aa26.34■■□□□ 1.81
CPNE1-202ENST00000352393 SHC3Q92529 594 aa26.34■■□□□ 1.81
CPNE1-202ENST00000352393 TAOK3Q9H2K8 898 aa26.34■■□□□ 1.81
CPNE1-202ENST00000352393 DBR1Q9UK59 544 aaKnown RBP26.34■■□□□ 1.81
CPNE1-202ENST00000352393 GTF3C4Q9UKN8 822 aa26.34■■□□□ 1.81
CPNE1-202ENST00000352393 ITGB5P18084 799 aa26.33■■□□□ 1.81
CPNE1-202ENST00000352393 CC2D2BQ6DHV5 1058 aa26.33■■□□□ 1.81
CPNE1-202ENST00000352393 NLGN1Q8N2Q7 840 aa26.33■■□□□ 1.81
CPNE1-202ENST00000352393 UHMK1Q8TAS1 419 aaKnown RBP26.33■■□□□ 1.81
CPNE1-202ENST00000352393 CHURC1Q8WUH1 139 aa26.33■■□□□ 1.81
CPNE1-202ENST00000352393 PPIP5K2O43314 1243 aa26.33■■□□□ 1.81
CPNE1-202ENST00000352393 SPOPO43791 374 aa26.33■■□□□ 1.81
CPNE1-202ENST00000352393 SNCBQ16143 134 aa26.33■■□□□ 1.81
CPNE1-202ENST00000352393 SLC47A2Q86VL8 602 aa26.33■■□□□ 1.81
CPNE1-202ENST00000352393 ANKS4BQ8N8V4 417 aa26.33■■□□□ 1.81
CPNE1-202ENST00000352393 BTBD6Q96KE9 485 aa26.33■■□□□ 1.81
CPNE1-202ENST00000352393 ST6GALNAC4Q9H4F1 302 aa26.33■■□□□ 1.81
CPNE1-202ENST00000352393 RASGRF2O14827 1237 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 CYP26A1O43174 497 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 P4HBP07237 508 aaKnown RBP26.32■■□□□ 1.8
CPNE1-202ENST00000352393 ADRB2P07550 413 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 RARRES1P49788 294 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 GTF2BQ00403 316 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 SLCO2A1Q92959 643 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 ZNF653Q96CK0 615 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 PRMT6Q96LA8 375 aaPredicted RBP26.32■■□□□ 1.8
CPNE1-202ENST00000352393 DEFB129Q9H1M3 183 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 LRRC19Q9H756 370 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 ACP6Q9NPH0 428 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 PTPN22Q9Y2R2 807 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 ZHX2Q9Y6X8 837 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 RGPD3A6NKT7 1758 aaPredicted RBP26.32■■□□□ 1.8
CPNE1-202ENST00000352393 ATP2C2O75185 946 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 IRX3P78415 501 aaPredicted RBP26.32■■□□□ 1.8
CPNE1-202ENST00000352393 RGPD4Q7Z3J3 1758 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 CCDC50Q8IVM0 306 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 PSPC1Q8WXF1 523 aaKnown RBP26.32■■□□□ 1.8
CPNE1-202ENST00000352393 MYCBPQ99417 103 aaPredicted RBP26.32■■□□□ 1.8
CPNE1-202ENST00000352393 PRMT1Q99873 361 aaKnown RBP26.32■■□□□ 1.8
CPNE1-202ENST00000352393 UVRAGQ9P2Y5 699 aa26.32■■□□□ 1.8
CPNE1-202ENST00000352393 PLA2G6O60733 806 aa26.31■■□□□ 1.8
CPNE1-202ENST00000352393 GSTA1P08263 222 aa26.31■■□□□ 1.8
CPNE1-202ENST00000352393 HSPA1LP34931 641 aa26.31■■□□□ 1.8
CPNE1-202ENST00000352393 SLCO1A2P46721 670 aa26.31■■□□□ 1.8
CPNE1-202ENST00000352393 RWDD2BP57060 319 aa26.31■■□□□ 1.8
CPNE1-202ENST00000352393 SNRPFP62306 86 aaKnown RBP26.31■■□□□ 1.8
CPNE1-202ENST00000352393 GRIPAP1Q4V328 841 aa26.31■■□□□ 1.8
CPNE1-202ENST00000352393 RNF207Q6ZRF8 634 aa26.31■■□□□ 1.8
CPNE1-202ENST00000352393 FAM228AQ86W67 206 aa26.31■■□□□ 1.8
CPNE1-202ENST00000352393 MTFR1LQ9H019 292 aa26.31■■□□□ 1.8
CPNE1-202ENST00000352393 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.31■■□□□ 1.8
CPNE1-202ENST00000352393 ZBTB21Q9ULJ3 1066 aa26.31■■□□□ 1.8
CPNE1-202ENST00000352393 SLC12A4Q9UP95 1085 aa26.31■■□□□ 1.8
CPNE1-202ENST00000352393 DHX15O43143 795 aaKnown RBP26.3■■□□□ 1.8
CPNE1-202ENST00000352393 ECEL1O95672 775 aa26.3■■□□□ 1.8
CPNE1-202ENST00000352393 KCNJ1P48048 391 aa26.3■■□□□ 1.8
CPNE1-202ENST00000352393 CNGA2Q16280 664 aa26.3■■□□□ 1.8
CPNE1-202ENST00000352393 PREPLQ4J6C6 727 aaPredicted RBP26.3■■□□□ 1.8
CPNE1-202ENST00000352393 TRMT10CQ7L0Y3 403 aaKnown RBP26.3■■□□□ 1.8
CPNE1-202ENST00000352393 MIGA2Q7L4E1 593 aa26.3■■□□□ 1.8
CPNE1-202ENST00000352393 HAUS6Q7Z4H7 955 aa26.3■■□□□ 1.8
CPNE1-202ENST00000352393 LDHDQ86WU2 507 aa26.3■■□□□ 1.8
CPNE1-202ENST00000352393 PPM1KQ8N3J5 372 aa26.3■■□□□ 1.8
CPNE1-202ENST00000352393 ROPN1BQ9BZX4 212 aaPredicted RBP26.3■■□□□ 1.8
CPNE1-202ENST00000352393 ROPN1Q9HAT0 212 aaPredicted RBP26.3■■□□□ 1.8
CPNE1-202ENST00000352393 TP73O15350 636 aa26.3■■□□□ 1.8
CPNE1-202ENST00000352393 HSD17B4P51659 736 aa26.3■■□□□ 1.8
CPNE1-202ENST00000352393 MFAP3P55082 362 aa26.3■■□□□ 1.8
CPNE1-202ENST00000352393 MAGEC3Q8TD91 643 aa26.3■■□□□ 1.8
CPNE1-202ENST00000352393 SEMA4DQ92854 862 aa26.3■■□□□ 1.8
CPNE1-202ENST00000352393 ZNF622Q969S3 477 aaKnown RBP eCLIP26.3■■□□□ 1.84e-6■■□□□ 12.1
CPNE1-202ENST00000352393 KCNH7Q9NS40 1196 aa26.3■■□□□ 1.8
CPNE1-202ENST00000352393 PKD2L1Q9P0L9 805 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms