RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 COILP38432 576 aaPredicted RBP19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 DRG2P55039 364 aaKnown RBP19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 FKBP1AP62942 108 aaKnown RBP19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 MRPS9P82933 396 aaKnown RBP19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 CETN1Q12798 172 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 RASA3Q14644 834 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 SIX1Q15475 284 aaPredicted RBP19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 GKAP1Q5VSY0 366 aaPredicted RBP19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 ZNF564Q8TBZ8 553 aaPredicted RBP19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 ZNF317Q96PQ6 595 aaPredicted RBP19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 DDX23Q9BUQ8 820 aaKnown RBP19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 KLC4Q9NSK0 619 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 PCYOX1Q9UHG3 505 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 GGA2Q9UJY4 613 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 TRPC5Q9UL62 973 aaPredicted RBP19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 CCPG1Q9ULG6 757 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 SYNGAP1Q96PV0 1343 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 MIF4GDA9UHW6 222 aaKnown RBP19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 ATP9AO75110 1047 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 RASSF9O75901 435 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 CREB1P16220 341 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 HADHBP55084 474 aaKnown RBP19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 HOOK3Q86VS8 718 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 SLC13A5Q86YT5 568 aaPredicted RBP19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 RIT2Q99578 217 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 PRMT1Q99873 361 aaKnown RBP19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 PI4K2AQ9BTU6 479 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 FAM129AQ9BZQ8 928 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 KIF13BQ9NQT8 1826 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 H0YIN7 160 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 DLATP10515 647 aaKnown RBP19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 TRIP13Q15645 432 aaPredicted RBP19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 KRT27Q7Z3Y8 459 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 LRRC34Q8IZ02 419 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 ATXN2LQ8WWM7 1075 aaKnown RBP19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 ZNF653Q96CK0 615 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 PWWP2AQ96N64 755 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 TMEM206Q9H813 350 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 HERC5Q9UII4 1024 aaKnown RBP19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 RASAL2Q9UJF2 1139 aa19.44■□□□□ 0.7
PTP4A3-202ENST00000349124 SPATA31A6Q5VVP1 1343 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 MMP13P45452 471 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 SMTNP53814 917 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 PPP2R5EQ16537 467 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 FAM102BQ5T8I3 360 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 SEL1L2Q5TEA6 688 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 OTUD6AQ7L8S5 288 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 ATG4AQ8WYN0 398 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 ZNF70Q9UC06 446 aaPredicted RBP19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 USP20Q9Y2K6 914 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 ZNF536O15090 1300 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 CCDC169A6NNP5 214 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 PPIP5K2O43314 1243 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 RIPK2O43353 540 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 EIF2AK2P19525 551 aaKnown RBP19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 YWHABP31946 246 aaKnown RBP19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 SCTRP47872 440 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 SETQ01105 290 aaPredicted RBP19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 LRRC14Q15048 493 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 TAS1R2Q8TE23 839 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 RPS6KC1Q96S38 1066 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 HERPUD2Q9BSE4 406 aa19.43■□□□□ 0.7
PTP4A3-202ENST00000349124 SPDYE2BA6NHP3 402 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 TP73O15350 636 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 SPDYE6P0CI01 402 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 CYP11B1P15538 503 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 MUTP22033 750 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 LONRF1Q17RB8 773 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 TKFCQ3LXA3 575 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 CCT6BQ92526 530 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 PGM2Q96G03 612 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 CEP89Q96ST8 783 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 FAM118BQ9BPY3 351 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 GGT7Q9UJ14 662 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 ACSL3O95573 720 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 ALAS1P13196 640 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 QARSP47897 775 aaKnown RBP19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 SNRNP35Q16560 246 aaKnown RBP19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 AKT1S1Q96B36 256 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 ELAC2Q9BQ52 826 aaKnown RBP19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 CNOT10Q9H9A5 744 aaKnown RBP19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 EHMT1Q9H9B1 1298 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 AGO4Q9HCK5 861 aaKnown RBP19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 MLXIPLQ9NP71 852 aa19.42■□□□□ 0.7
PTP4A3-202ENST00000349124 CAP2P40123 477 aa19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 GTF2BQ00403 316 aa19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 AUHQ13825 339 aaKnown RBP19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 MYBPC2Q14324 1141 aa19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 MGARPQ8TDB4 240 aa19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 HELQQ8TDG4 1101 aa19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 CLEC4DQ8WXI8 215 aa19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 C21orf2O43822 256 aa19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 RFX1P22670 979 aa19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 SHC3Q92529 594 aa19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 HVCN1Q96D96 273 aa19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 TAAR1Q96RJ0 339 aa19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 WNT8AQ9H1J5 351 aa19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 RAVER2Q9HCJ3 691 aaKnown RBP19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 CHST7Q9NS84 486 aa19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 INTS9Q9NV88 658 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms