RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 BARGINQ6ZT62 677 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 TRMT10CQ7L0Y3 403 aaKnown RBP11.15□□□□□ -0.62
SMG7-201ENST00000347615 NLGN1Q8N2Q7 840 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 AFAP1L2Q8N4X5 818 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 DNAJC7Q99615 494 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 ARPP19P56211 112 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 FAM160B1Q5W0V3 765 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 IL31Q6EBC2 164 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 SNRNP48Q6IEG0 339 aaKnown RBP11.15□□□□□ -0.62
SMG7-201ENST00000347615 PRPF38AQ8NAV1 312 aaKnown RBP11.15□□□□□ -0.62
SMG7-201ENST00000347615 MORC4Q8TE76 937 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 SKA2Q8WVK7 121 aaPredicted RBP11.15□□□□□ -0.62
SMG7-201ENST00000347615 ERP27Q96DN0 273 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 SUFUQ9UMX1 484 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 ZBTB12Q9Y330 459 aaPredicted RBP11.15□□□□□ -0.62
SMG7-201ENST00000347615 YWHABP31946 246 aaKnown RBP11.14□□□□□ -0.63
SMG7-201ENST00000347615 KLHDC7AQ5VTJ3 777 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 SLC17A8Q8NDX2 589 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 CXorf38Q8TB03 319 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 ZNF507Q8TCN5 953 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 RAPGEF5Q92565 580 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 NUDT12Q9BQG2 462 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 SLITRK6Q9H5Y7 841 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 GPRC5CQ9NQ84 441 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 ATF5Q9Y2D1 282 aaPredicted RBP11.14□□□□□ -0.63
SMG7-201ENST00000347615 IQANK1A0A1B0GTG1 560 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 M0QYV0 167 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 IGF2BP3O00425 579 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMG7-201ENST00000347615 HAUS5O94927 633 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 YY1P25490 414 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 TARSP26639 723 aaKnown RBP11.14□□□□□ -0.63
SMG7-201ENST00000347615 ARL4CP56559 192 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 MAP7Q14244 749 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 ZNF699Q32M78 642 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 PACS2Q86VP3 889 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 CEP70Q8NHQ1 597 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 LRGUKQ96M69 825 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 USP20Q9Y2K6 914 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 ZBBXA8MT70 800 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 MYBL2P10244 700 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 SKIP12755 728 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 QARSP47897 775 aaKnown RBP11.14□□□□□ -0.63
SMG7-201ENST00000347615 PSMC1P62191 440 aaKnown RBP11.14□□□□□ -0.63
SMG7-201ENST00000347615 KRT39Q6A163 491 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 ARHGAP27Q6ZUM4 889 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 UBE4BO95155 1302 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 DCTN3O75935 186 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 GARSP41250 739 aaKnown RBP11.14□□□□□ -0.63
SMG7-201ENST00000347615 ARFIP2P53365 341 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 NPEPPSP55786 919 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 PSMC6P62333 389 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 TNFAIP1Q13829 316 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 RWDD4Q6NW29 188 aaKnown RBP11.14□□□□□ -0.63
SMG7-201ENST00000347615 AADACL2Q6P093 401 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 RNF135Q8IUD6 432 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 RBM15Q96T37 977 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMG7-201ENST00000347615 TRABDQ9H4I3 376 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 CXorf56Q9H5V9 222 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 VWDEQ8N2E2 1590 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 TNS3Q68CZ2 1445 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 POLRMTO00411 1230 aaKnown RBP11.14□□□□□ -0.63
SMG7-201ENST00000347615 MYCP01106 439 aaPredicted RBP11.14□□□□□ -0.63
SMG7-201ENST00000347615 ITGA8P53708 1063 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 DNAJC3Q13217 504 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 CDKAL1Q5VV42 579 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 CRLF3Q8IUI8 442 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 TSEN2Q8NCE0 465 aaKnown RBP11.14□□□□□ -0.63
SMG7-201ENST00000347615 KIAA0895Q8NCT3 520 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 SLC26A7Q8TE54 656 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 FAM20AQ96MK3 541 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 NBPF3Q9H094 633 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 RPF1Q9H9Y2 349 aaKnown RBP11.14□□□□□ -0.63
SMG7-201ENST00000347615 SLC9A2Q9UBY0 812 aa11.14□□□□□ -0.63
SMG7-201ENST00000347615 CALCAP01258 141 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 SPP2Q13103 211 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 ART3Q13508 389 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 CYP4A22Q5TCH4 519 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 LDHDQ86WU2 507 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 SEPT12Q8IYM1 358 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 TPCN2Q8NHX9 752 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 TBC1D16Q8TBP0 767 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 MCEEQ96PE7 176 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 ZHX2Q9Y6X8 837 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 SGPL1O95470 568 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 HSPA4LO95757 839 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 NDUFB10O96000 172 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 PON1P27169 355 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 RGS7P49802 495 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 MMGT1Q8N4V1 131 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 NSMCE1Q8WV22 266 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 TCRBV5S4A2TA0A5A2 114 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 PDXKO00764 312 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 PHF2O75151 1096 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 EYA4O95677 639 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 SOX10P56693 466 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 CDC42EP5Q6NZY7 148 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 MYCBPAPQ8TBZ2 947 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 HNRNPLLQ8WVV9 542 aaKnown RBP11.13□□□□□ -0.63
SMG7-201ENST00000347615 WNT8AQ9H1J5 351 aa11.13□□□□□ -0.63
SMG7-201ENST00000347615 RBAKQ9NYW8 714 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms