RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 MYBPC2Q14324 1141 aa20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 ZNF568Q3ZCX4 644 aa20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 UBXN11Q5T124 520 aa20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 CRELD2Q6UXH1 353 aaPredicted RBP20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 FILIP1Q7Z7B0 1213 aa20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 CEP120Q8N960 986 aa20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 MSTO1Q9BUK6 570 aa20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 EIF2AQ9BY44 585 aaKnown RBP20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 PIN4Q9Y237 131 aaKnown RBP20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 MKI67P46013 3256 aaKnown RBP20.75■□□□□ 0.91
CHMP4A-201ENST00000347519 CLDN3O15551 220 aa20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 MGEA5O60502 916 aa20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 RPL13P26373 211 aaKnown RBP20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 PAK2Q13177 524 aa20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 PCBP1Q15365 356 aaKnown RBP eCLIP20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 TCTN1Q2MV58 587 aa20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 SLFN12LQ6IEE8 588 aa20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 CBWD2Q8IUF1 395 aa20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 XXYLT1Q8NBI6 393 aa20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 RDH13Q8NBN7 331 aa20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 NOC3LQ8WTT2 800 aaKnown RBP20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 BORCS6Q96GS4 357 aa20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 CNOT6LQ96LI5 555 aaKnown RBP20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 TCHPQ9BT92 498 aa20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 AGO2Q9UKV8 859 aaKnown RBP20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 SQORQ9Y6N5 450 aa20.74■□□□□ 0.91
CHMP4A-201ENST00000347519 GOLGA6L3A6NEY3 463 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 KCNJ18B7U540 433 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 N4BP3O15049 544 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 GPR182O15218 404 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 EXOC3O60645 756 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 NPTXRO95502 500 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 AXLP30530 894 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 TNFSF9P41273 254 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 ACOT2P49753 483 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 KCNJ12Q14500 433 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 DSC3Q14574 896 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 NOLC1Q14978 699 aaKnown RBP eCLIP20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 APTXQ7Z2E3 356 aaKnown RBP20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 TMEM192Q8IY95 271 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 VWCEQ96DN2 955 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 FBXL18Q96ME1 805 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 FAM213AQ9BRX8 229 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 PRDM5Q9NQX1 630 aaPredicted RBP20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 ANK1P16157 1881 aa20.73■□□□□ 0.91
CHMP4A-201ENST00000347519 KIAA0355O15063 1070 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 SLC34A2O95436 690 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 WNT7BP56706 349 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 TCP11X2Q5H9J9 407 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 PRPF38BQ5VTL8 546 aaKnown RBP20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 NOTUMQ6P988 496 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 CREBRFQ8IUR6 639 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 FAM186BQ8IYM0 893 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 GPD1LQ8N335 351 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 USP38Q8NB14 1042 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 PLEKHO2Q8TD55 490 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 OGTO15294 1046 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 MEFVO15553 781 aaPredicted RBP20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 EXTL3O43909 919 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 FGFR1OPO95684 399 aaKnown RBP20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 MCF2P10911 925 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 SLC27A1Q6PCB7 646 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 THNSL1Q8IYQ7 743 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 GRPEL1Q9HAV7 217 aa20.72■□□□□ 0.91
CHMP4A-201ENST00000347519 SLC16A3O15427 465 aaKnown RBP20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 PSMC2P35998 433 aaKnown RBP20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 OSTNP61366 133 aa20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 NCBP1Q09161 790 aaKnown RBP20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 KRT31Q15323 416 aa20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 SNRNP35Q16560 246 aaKnown RBP20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 UVSSAQ2YD98 709 aa20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 CCDC40Q4G0X9 1142 aa20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 PLEKHG4Q58EX7 1191 aa20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 RTN4RL1Q86UN2 441 aaPredicted RBP20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 LINC01599Q8WXQ3 324 aa20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 MKNK1Q9BUB5 465 aa20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 IFIH1Q9BYX4 1025 aaKnown RBP20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 TAB2Q9NYJ8 693 aa20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 LIMA1Q9UHB6 759 aaKnown RBP20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 FRMD4BQ9Y2L6 1034 aa20.71■□□□□ 0.91
CHMP4A-201ENST00000347519 TIMP1P01033 207 aa20.7■□□□□ 0.9
CHMP4A-201ENST00000347519 CXCL10P02778 98 aa20.7■□□□□ 0.9
CHMP4A-201ENST00000347519 EPB41P11171 864 aaKnown RBP20.7■□□□□ 0.9
CHMP4A-201ENST00000347519 CDK11BP21127 795 aaKnown RBP20.7■□□□□ 0.9
CHMP4A-201ENST00000347519 MARSP56192 900 aaKnown RBP20.7■□□□□ 0.9
CHMP4A-201ENST00000347519 TPM4P67936 248 aa20.7■□□□□ 0.9
CHMP4A-201ENST00000347519 FANCCQ00597 558 aa20.7■□□□□ 0.9
CHMP4A-201ENST00000347519 TWF2Q6IBS0 349 aaKnown RBP20.7■□□□□ 0.9
CHMP4A-201ENST00000347519 DBF4BQ8NFT6 615 aa20.7■□□□□ 0.9
CHMP4A-201ENST00000347519 MFSD14AQ96MC6 490 aa20.7■□□□□ 0.9
CHMP4A-201ENST00000347519 CPSF3Q9UKF6 684 aaKnown RBP20.7■□□□□ 0.9
CHMP4A-201ENST00000347519 HES2Q9Y543 173 aa20.7■□□□□ 0.9
CHMP4A-201ENST00000347519 TRIP11Q15643 1979 aa20.69■□□□□ 0.9
CHMP4A-201ENST00000347519 KIAA0391O15091 583 aaKnown RBP20.69■□□□□ 0.9
CHMP4A-201ENST00000347519 GNA14O95837 355 aa20.69■□□□□ 0.9
CHMP4A-201ENST00000347519 STAG3L1P0CL83 205 aa20.69■□□□□ 0.9
CHMP4A-201ENST00000347519 EEF1GP26641 437 aaKnown RBP20.69■□□□□ 0.9
CHMP4A-201ENST00000347519 MTIF2P46199 727 aaKnown RBP20.69■□□□□ 0.9
CHMP4A-201ENST00000347519 CYP24A1Q07973 514 aa20.69■□□□□ 0.9
CHMP4A-201ENST00000347519 DCAF4L1Q3SXM0 396 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms