RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 RTN2O75298 545 aa16.65■□□□□ 0.26
UPF3B-202ENST00000345865 TCEAL1Q15170 157 aa16.65■□□□□ 0.26
UPF3B-202ENST00000345865 XRRA1Q6P2D8 792 aa16.65■□□□□ 0.26
UPF3B-202ENST00000345865 SLC17A8Q8NDX2 589 aa16.65■□□□□ 0.26
UPF3B-202ENST00000345865 OR2W6PQ8NHA6 318 aa16.65■□□□□ 0.26
UPF3B-202ENST00000345865 SPIRE2Q8WWL2 714 aa16.65■□□□□ 0.26
UPF3B-202ENST00000345865 DHX38Q92620 1227 aaKnown RBP16.65■□□□□ 0.26
UPF3B-202ENST00000345865 VTI1AQ96AJ9 217 aa16.65■□□□□ 0.26
UPF3B-202ENST00000345865 MFSD14AQ96MC6 490 aa16.65■□□□□ 0.26
UPF3B-202ENST00000345865 TMEM8AQ9HCN3 771 aa16.65■□□□□ 0.26
UPF3B-202ENST00000345865 NFS1Q9Y697 457 aa16.65■□□□□ 0.26
UPF3B-202ENST00000345865 CALCAP01258 141 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 GPC3P51654 580 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 PTENP60484 403 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 SKOR1P84550 965 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 SKIDA1Q1XH10 827 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 SV2AQ7L0J3 742 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 MAATS1Q7Z4T9 603 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 ZDHHC14Q8IZN3 488 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 CCDC26Q8TAB7 109 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 NSUN6Q8TEA1 469 aaKnown RBP16.64■□□□□ 0.25
UPF3B-202ENST00000345865 KIFAP3Q92845 792 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 TATDN2Q93075 761 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 BTBD6Q96KE9 485 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 DPH5Q9H2P9 285 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 RABEP2Q9H5N1 569 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 A1CFQ9NQ94 594 aaKnown RBP16.64■□□□□ 0.25
UPF3B-202ENST00000345865 CYP39A1Q9NYL5 469 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 PPP1R1BQ9UD71 204 aaPredicted RBP16.64■□□□□ 0.25
UPF3B-202ENST00000345865 PNMA2Q9UL42 364 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 LCTP09848 1927 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 TMEM110-MUSTN1A8MSY1 372 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 PPFIA4O75335 1185 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 CYP24A1Q07973 514 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 C11orf63Q6NUN7 778 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 OTUD6AQ7L8S5 288 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 ATP8B4Q8TF62 1192 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 POMGNT1Q8WZA1 660 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 GLG1Q92896 1179 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 HVCN1Q96D96 273 aa16.64■□□□□ 0.25
UPF3B-202ENST00000345865 DIS3Q9Y2L1 958 aaKnown RBP16.64■□□□□ 0.25
UPF3B-202ENST00000345865 MAFGO15525 162 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 GZMAP12544 262 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 CYP11B1P15538 503 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 COMTP21964 271 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 PEX5P50542 639 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 ATP1A2P50993 1020 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 MFAP3P55082 362 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 GNGT1P63211 74 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 SP2Q02086 613 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 FSTL1Q12841 308 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 MESDQ14696 234 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 ANGEL2Q5VTE6 544 aaKnown RBP16.63■□□□□ 0.25
UPF3B-202ENST00000345865 ZNF526Q8TF50 670 aaPredicted RBP16.63■□□□□ 0.25
UPF3B-202ENST00000345865 DDX1Q92499 740 aaKnown RBP16.63■□□□□ 0.25
UPF3B-202ENST00000345865 PI4K2AQ9BTU6 479 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 TRIM31Q9BZY9 425 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 JPH1Q9HDC5 661 aaPredicted RBP16.63■□□□□ 0.25
UPF3B-202ENST00000345865 PICK1Q9NRD5 415 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 RAB20Q9NX57 234 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 RSPH14Q9UHP6 348 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 MYH9P35579 1960 aaKnown RBP16.63■□□□□ 0.25
UPF3B-202ENST00000345865 FZD9O00144 591 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 GRIN3BO60391 1043 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 DLATP10515 647 aaKnown RBP16.63■□□□□ 0.25
UPF3B-202ENST00000345865 ACTR2P61160 394 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 PRKCEQ02156 737 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 CEP85LQ5SZL2 805 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 DCAF15Q66K64 600 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 ABHD15Q6UXT9 468 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 SRLQ86TD4 932 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 FBXL13Q8NEE6 735 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 TMC2Q8TDI7 906 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 ATP6V0A1Q93050 837 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 C12orf42Q96LP6 360 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 CYP26B1Q9NR63 512 aa16.63■□□□□ 0.25
UPF3B-202ENST00000345865 SEPT9Q9UHD8 586 aaPredicted RBP16.63■□□□□ 0.25
UPF3B-202ENST00000345865 HNRNPDLO14979 420 aaKnown RBP16.62■□□□□ 0.25
UPF3B-202ENST00000345865 EIF3HO15372 352 aaKnown RBP eCLIP16.62■□□□□ 0.25
UPF3B-202ENST00000345865 OAZ1P54368 228 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 WNT7BP56706 349 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 PDCLQ13371 301 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 ZNF516Q92618 1163 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 CD101Q93033 1021 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 ZSWIM1Q9BR11 485 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 FAM213AQ9BRX8 229 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 C17orf75Q9HAS0 396 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 AS3MTQ9HBK9 375 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 SLC9A2Q9UBY0 812 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 TRPC6Q9Y210 931 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 PEX10O60683 326 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 DGAT1O75907 488 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 MTA2O94776 668 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 PSAPP07602 524 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 ATP4AP20648 1035 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 SF3B2Q13435 895 aaKnown RBP16.62■□□□□ 0.25
UPF3B-202ENST00000345865 CATSPERGQ6ZRH7 1159 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 LRRC4CQ9HCJ2 640 aa16.62■□□□□ 0.25
UPF3B-202ENST00000345865 UTP11Q9Y3A2 253 aaKnown RBP16.62■□□□□ 0.25
UPF3B-202ENST00000345865 RRP15Q9Y3B9 282 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms