RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 DDIT3P35638 169 aa21.82■■□□□ 1.08
CLTA-202ENST00000345519 SLC11A1P49279 550 aa21.82■■□□□ 1.08
CLTA-202ENST00000345519 KRT17Q04695 432 aa21.82■■□□□ 1.08
CLTA-202ENST00000345519 ATF7IP2Q5U623 682 aa21.82■■□□□ 1.08
CLTA-202ENST00000345519 EEF1DP3Q658K8 133 aa21.82■■□□□ 1.08
CLTA-202ENST00000345519 ATL3Q6DD88 541 aa21.82■■□□□ 1.08
CLTA-202ENST00000345519 DDX53Q86TM3 631 aaKnown RBP21.82■■□□□ 1.08
CLTA-202ENST00000345519 RNF168Q8IYW5 571 aaPredicted RBP21.82■■□□□ 1.08
CLTA-202ENST00000345519 EFHBQ8N7U6 833 aa21.82■■□□□ 1.08
CLTA-202ENST00000345519 BCL7CQ8WUZ0 217 aaPredicted RBP21.82■■□□□ 1.08
CLTA-202ENST00000345519 ZFP42Q96MM3 310 aa21.82■■□□□ 1.08
CLTA-202ENST00000345519 FIZ1Q96SL8 496 aa21.82■■□□□ 1.08
CLTA-202ENST00000345519 CDCA3Q99618 268 aaPredicted RBP21.82■■□□□ 1.08
CLTA-202ENST00000345519 ADPGKQ9BRR6 497 aa21.82■■□□□ 1.08
CLTA-202ENST00000345519 NGRNQ9NPE2 291 aaKnown RBP21.82■■□□□ 1.08
CLTA-202ENST00000345519 MIOSQ9NXC5 875 aa21.82■■□□□ 1.08
CLTA-202ENST00000345519 LARSQ9P2J5 1176 aaKnown RBP21.82■■□□□ 1.08
CLTA-202ENST00000345519 CCDC169A6NNP5 214 aa21.81■■□□□ 1.08
CLTA-202ENST00000345519 HSP90AA1P07900 732 aaKnown RBP21.81■■□□□ 1.08
CLTA-202ENST00000345519 MAPTP10636 758 aaKnown RBP21.81■■□□□ 1.08
CLTA-202ENST00000345519 KCNQ1P51787 676 aa21.81■■□□□ 1.08
CLTA-202ENST00000345519 RNASELQ05823 741 aaKnown RBP21.81■■□□□ 1.08
CLTA-202ENST00000345519 GRIK3Q13003 919 aa21.81■■□□□ 1.08
CLTA-202ENST00000345519 ADAM15Q13444 863 aa21.81■■□□□ 1.08
CLTA-202ENST00000345519 GIT2Q14161 759 aa21.81■■□□□ 1.08
CLTA-202ENST00000345519 MCM6Q14566 821 aa21.81■■□□□ 1.08
CLTA-202ENST00000345519 NAB2Q15742 525 aa21.81■■□□□ 1.08
CLTA-202ENST00000345519 SPECC1Q5M775 1068 aa21.81■■□□□ 1.08
CLTA-202ENST00000345519 GPBP1Q86WP2 473 aa21.81■■□□□ 1.08
CLTA-202ENST00000345519 TMEM169Q96HH4 297 aa21.81■■□□□ 1.08
CLTA-202ENST00000345519 ZNF396Q96N95 335 aaPredicted RBP21.81■■□□□ 1.08
CLTA-202ENST00000345519 VN1R3Q9BXE9 311 aa21.81■■□□□ 1.08
CLTA-202ENST00000345519 MRPL4Q9BYD3 311 aaKnown RBP21.81■■□□□ 1.08
CLTA-202ENST00000345519 ZBP1Q9H171 429 aa21.81■■□□□ 1.08
CLTA-202ENST00000345519 MARCH5Q9NX47 278 aa21.81■■□□□ 1.08
CLTA-202ENST00000345519 PUF60Q9UHX1 559 aaKnown RBP21.81■■□□□ 1.08
CLTA-202ENST00000345519 PCDHGC5Q9Y5F6 944 aa21.81■■□□□ 1.08
CLTA-202ENST00000345519 C2orf16Q68DN1 1984 aa21.8■■□□□ 1.08
CLTA-202ENST00000345519 TBX10O75333 385 aa21.8■■□□□ 1.08
CLTA-202ENST00000345519 GLP2RO95838 553 aa21.8■■□□□ 1.08
CLTA-202ENST00000345519 POMCP01189 267 aa21.8■■□□□ 1.08
CLTA-202ENST00000345519 GTF2F1P35269 517 aaKnown RBP eCLIP21.8■■□□□ 1.08
CLTA-202ENST00000345519 SCNN1GP51170 649 aa21.8■■□□□ 1.08
CLTA-202ENST00000345519 CEBPZQ03701 1054 aaKnown RBP21.8■■□□□ 1.08
CLTA-202ENST00000345519 DUSP6Q16828 381 aa21.8■■□□□ 1.08
CLTA-202ENST00000345519 TMEM184AQ6ZMB5 413 aa21.8■■□□□ 1.08
CLTA-202ENST00000345519 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.8■■□□□ 1.08
CLTA-202ENST00000345519 TCF25Q9BQ70 676 aa21.8■■□□□ 1.08
CLTA-202ENST00000345519 CCDC39Q9UFE4 941 aa21.8■■□□□ 1.08
CLTA-202ENST00000345519 USP20Q9Y2K6 914 aa21.8■■□□□ 1.08
CLTA-202ENST00000345519 A0A087X0B3 334 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 NPHP3-ACAD11A0A0J9YXS1 232 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 SFI1A8K8P3 1242 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 NT5C1B-RDH14C9J2C7 533 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 H0YCG3 227 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 PTGESO14684 152 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 SPTLC2O15270 562 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 SLC16A4O15374 487 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 RECQL4O94761 1208 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 SSBP05455 408 aaKnown RBP eCLIP21.79■■□□□ 1.08
CLTA-202ENST00000345519 AKAP5P24588 427 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 SMTNP53814 917 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 RAD51AP2Q09MP3 1159 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 ZPBP2Q6X784 338 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 MSLNLQ96KJ4 702 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 CDT1Q9H211 546 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 ST6GALNAC4Q9H4F1 302 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 PARVGQ9HBI0 331 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 TRIOO75962 3097 aa21.79■■□□□ 1.08
CLTA-202ENST00000345519 NRP1O14786 923 aa21.78■■□□□ 1.08
CLTA-202ENST00000345519 PIGRP01833 764 aa21.78■■□□□ 1.08
CLTA-202ENST00000345519 CTSAP10619 480 aa21.78■■□□□ 1.08
CLTA-202ENST00000345519 KCNA5P22460 613 aa21.78■■□□□ 1.08
CLTA-202ENST00000345519 TXLNAP40222 546 aa21.78■■□□□ 1.08
CLTA-202ENST00000345519 DLX2Q07687 328 aaPredicted RBP21.78■■□□□ 1.08
CLTA-202ENST00000345519 SMC1AQ14683 1233 aaKnown RBP21.78■■□□□ 1.08
CLTA-202ENST00000345519 STK38Q15208 465 aa21.78■■□□□ 1.08
CLTA-202ENST00000345519 PUS10Q3MIT2 529 aaKnown RBP21.78■■□□□ 1.08
CLTA-202ENST00000345519 XKR4Q5GH76 650 aa21.78■■□□□ 1.08
CLTA-202ENST00000345519 MRPL43Q8N983 215 aaKnown RBP21.78■■□□□ 1.08
CLTA-202ENST00000345519 CLDND1Q9NY35 253 aa21.78■■□□□ 1.08
CLTA-202ENST00000345519 SNTG2Q9NY99 539 aa21.78■■□□□ 1.08
CLTA-202ENST00000345519 C2orf71A6NGG8 1288 aa21.77■■□□□ 1.08
CLTA-202ENST00000345519 HIDE1A8MVS5 230 aa21.77■■□□□ 1.08
CLTA-202ENST00000345519 DLL1O00548 723 aa21.77■■□□□ 1.08
CLTA-202ENST00000345519 LINC01565O15544 149 aa21.77■■□□□ 1.08
CLTA-202ENST00000345519 MCF2P10911 925 aa21.77■■□□□ 1.08
CLTA-202ENST00000345519 GRM5P41594 1212 aa21.77■■□□□ 1.08
CLTA-202ENST00000345519 CACNB1Q02641 598 aaPredicted RBP21.77■■□□□ 1.08
CLTA-202ENST00000345519 AXDND1Q5T1B0 1012 aaPredicted RBP21.77■■□□□ 1.08
CLTA-202ENST00000345519 PLPP4Q5VZY2 271 aa21.77■■□□□ 1.08
CLTA-202ENST00000345519 MPZL3Q6UWV2 235 aa21.77■■□□□ 1.08
CLTA-202ENST00000345519 ALKAL1Q6UXT8 129 aa21.77■■□□□ 1.08
CLTA-202ENST00000345519 CCDC73Q6ZRK6 1079 aa21.77■■□□□ 1.08
CLTA-202ENST00000345519 APBB1IPQ7Z5R6 666 aaPredicted RBP21.77■■□□□ 1.08
CLTA-202ENST00000345519 ADAMTS19Q8TE59 1207 aa21.77■■□□□ 1.08
CLTA-202ENST00000345519 ENTPD7Q9NQZ7 604 aa21.77■■□□□ 1.08
CLTA-202ENST00000345519 CLEC1BQ9P126 229 aa21.77■■□□□ 1.08
CLTA-202ENST00000345519 FRMD3A2A2Y4 597 aa21.76■■□□□ 1.07
CLTA-202ENST00000345519 GRXCR2A6NFK2 248 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms