RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 B4GALT3O60512 393 aa17.69■□□□□ 0.42
ATG4B-201ENST00000344376 CXCL14O95715 111 aa17.69■□□□□ 0.42
ATG4B-201ENST00000344376 OR1G1P47890 313 aa17.69■□□□□ 0.42
ATG4B-201ENST00000344376 SMTNP53814 917 aa17.69■□□□□ 0.42
ATG4B-201ENST00000344376 SLC12A3P55017 1021 aa17.69■□□□□ 0.42
ATG4B-201ENST00000344376 GRIK3Q13003 919 aa17.69■□□□□ 0.42
ATG4B-201ENST00000344376 FAM178BQ8IXR5 827 aa17.69■□□□□ 0.42
ATG4B-201ENST00000344376 TMEM134Q9H6X4 195 aa17.69■□□□□ 0.42
ATG4B-201ENST00000344376 PRKAG3Q9UGI9 489 aa17.69■□□□□ 0.42
ATG4B-201ENST00000344376 BARX2Q9UMQ3 279 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-201ENST00000344376 MTMR6Q9Y217 621 aa17.69■□□□□ 0.42
ATG4B-201ENST00000344376 PRG3Q9Y2Y8 225 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-201ENST00000344376 CLIC4Q9Y696 253 aa17.69■□□□□ 0.42
ATG4B-201ENST00000344376 TCF20Q9UGU0 1960 aaKnown RBP17.68■□□□□ 0.42
ATG4B-201ENST00000344376 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.68■□□□□ 0.42
ATG4B-201ENST00000344376 C2orf71A6NGG8 1288 aa17.68■□□□□ 0.42
ATG4B-201ENST00000344376 TTLL13PA6NNM8 815 aa17.68■□□□□ 0.42
ATG4B-201ENST00000344376 NRP1O14786 923 aa17.68■□□□□ 0.42
ATG4B-201ENST00000344376 MBTPS2O43462 519 aa17.68■□□□□ 0.42
ATG4B-201ENST00000344376 GLP2RO95838 553 aa17.68■□□□□ 0.42
ATG4B-201ENST00000344376 CTSAP10619 480 aa17.68■□□□□ 0.42
ATG4B-201ENST00000344376 DSC1Q08554 894 aa17.68■□□□□ 0.42
ATG4B-201ENST00000344376 RAD51AP2Q09MP3 1159 aa17.68■□□□□ 0.42
ATG4B-201ENST00000344376 COASYQ13057 564 aa17.68■□□□□ 0.42
ATG4B-201ENST00000344376 MAPK7Q13164 816 aa17.68■□□□□ 0.42
ATG4B-201ENST00000344376 COLGALT2Q8IYK4 626 aa17.68■□□□□ 0.42
ATG4B-201ENST00000344376 BCL7CQ8WUZ0 217 aaPredicted RBP17.68■□□□□ 0.42
ATG4B-201ENST00000344376 MSLNLQ96KJ4 702 aa17.68■□□□□ 0.42
ATG4B-201ENST00000344376 MRPL4Q9BYD3 311 aaKnown RBP17.68■□□□□ 0.42
ATG4B-201ENST00000344376 KLK14Q9P0G3 267 aa17.68■□□□□ 0.42
ATG4B-201ENST00000344376 CLEC1BQ9P126 229 aa17.68■□□□□ 0.42
ATG4B-201ENST00000344376 ARHGAP28Q9P2N2 729 aa17.68■□□□□ 0.42
ATG4B-201ENST00000344376 PLS3P13797 630 aa17.67■□□□□ 0.42
ATG4B-201ENST00000344376 SSTR3P32745 418 aaPredicted RBP17.67■□□□□ 0.42
ATG4B-201ENST00000344376 TXLNAP40222 546 aa17.67■□□□□ 0.42
ATG4B-201ENST00000344376 STRN3Q13033 797 aa17.67■□□□□ 0.42
ATG4B-201ENST00000344376 SMAD2Q15796 467 aaKnown RBP17.67■□□□□ 0.42
ATG4B-201ENST00000344376 SPIRE2Q8WWL2 714 aa17.67■□□□□ 0.42
ATG4B-201ENST00000344376 COLEC11Q9BWP8 271 aa17.67■□□□□ 0.42
ATG4B-201ENST00000344376 SNTG2Q9NY99 539 aa17.67■□□□□ 0.42
ATG4B-201ENST00000344376 TNFSF13BQ9Y275 285 aa17.67■□□□□ 0.42
ATG4B-201ENST00000344376 USP20Q9Y2K6 914 aa17.67■□□□□ 0.42
ATG4B-201ENST00000344376 H0YCG3 227 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 SLC16A4O15374 487 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 RECQL4O94761 1208 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 EDN1P05305 212 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 KRT18P05783 430 aaKnown RBP17.66■□□□□ 0.42
ATG4B-201ENST00000344376 PDIA4P13667 645 aaKnown RBP17.66■□□□□ 0.42
ATG4B-201ENST00000344376 PLCG1P19174 1290 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 MARCKSP29966 332 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-201ENST00000344376 CEBPZQ03701 1054 aaKnown RBP17.66■□□□□ 0.42
ATG4B-201ENST00000344376 GRIN1Q05586 938 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 KARSQ15046 597 aaKnown RBP17.66■□□□□ 0.42
ATG4B-201ENST00000344376 PTPAQ15257 358 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 NT5DC1Q5TFE4 455 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 EEF1DP3Q658K8 133 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 LLGL2Q6P1M3 1020 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 TMEM184AQ6ZMB5 413 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 GPBP1Q86WP2 473 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 GJD3Q8N144 294 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 SMRP1Q8NCR6 262 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 VN1R2Q8NFZ6 395 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 CASP10Q92851 521 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 POP1Q99575 1024 aaKnown RBP17.66■□□□□ 0.42
ATG4B-201ENST00000344376 MIOSQ9NXC5 875 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 LARSQ9P2J5 1176 aaKnown RBP17.66■□□□□ 0.42
ATG4B-201ENST00000344376 CCDC39Q9UFE4 941 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 ODF2LQ9ULJ1 636 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 IRAK3Q9Y616 596 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 SFI1A8K8P3 1242 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 DHX8Q14562 1220 aaKnown RBP17.66■□□□□ 0.42
ATG4B-201ENST00000344376 FAM173BQ6P4H8 233 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 ADHFE1Q8IWW8 467 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 AUTS2Q8WXX7 1259 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 RAD54LQ92698 747 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 ACO2Q99798 780 aaKnown RBP17.66■□□□□ 0.42
ATG4B-201ENST00000344376 NTPCRQ9BSD7 190 aaKnown RBP17.66■□□□□ 0.42
ATG4B-201ENST00000344376 EMILIN2Q9BXX0 1053 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 CCSER1Q9C0I3 900 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 SSX2IPQ9Y2D8 614 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 GDAQ9Y2T3 454 aa17.66■□□□□ 0.42
ATG4B-201ENST00000344376 SRPRBQ9Y5M8 271 aaKnown RBP17.66■□□□□ 0.42
ATG4B-201ENST00000344376 CLASP2O75122 1294 aaKnown RBP17.65■□□□□ 0.42
ATG4B-201ENST00000344376 SOD2P04179 222 aa17.65■□□□□ 0.42
ATG4B-201ENST00000344376 URODP06132 367 aa17.65■□□□□ 0.42
ATG4B-201ENST00000344376 HOXB8P17481 243 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-201ENST00000344376 RBM10P98175 930 aaKnown RBP17.65■□□□□ 0.42
ATG4B-201ENST00000344376 PTPN14Q15678 1187 aa17.65■□□□□ 0.42
ATG4B-201ENST00000344376 ZNF568Q3ZCX4 644 aa17.65■□□□□ 0.42
ATG4B-201ENST00000344376 ANKRD54Q6NXT1 300 aa17.65■□□□□ 0.42
ATG4B-201ENST00000344376 GSTCDQ8NEC7 633 aa17.65■□□□□ 0.42
ATG4B-201ENST00000344376 HERC2P3Q9BVR0 1158 aa17.65■□□□□ 0.42
ATG4B-201ENST00000344376 VN1R3Q9BXE9 311 aa17.65■□□□□ 0.42
ATG4B-201ENST00000344376 MRPL17Q9NRX2 175 aaKnown RBP17.65■□□□□ 0.42
ATG4B-201ENST00000344376 MARCH5Q9NX47 278 aa17.65■□□□□ 0.42
ATG4B-201ENST00000344376 FBXO2Q9UK22 296 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-201ENST00000344376 HCFC2Q9Y5Z7 792 aa17.65■□□□□ 0.42
ATG4B-201ENST00000344376 FAM13AO94988 1023 aa17.64■□□□□ 0.41
ATG4B-201ENST00000344376 THP07101 528 aa17.64■□□□□ 0.41
ATG4B-201ENST00000344376 YARSP54577 528 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms