RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 WLSQ5T9L3 541 aa14.41□□□□□ -0.1
TRIO-202ENST00000344204 CYP39A1Q9NYL5 469 aa14.41□□□□□ -0.1
TRIO-202ENST00000344204 CASP1P29466 404 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 RPS6P62753 249 aaKnown RBP14.4□□□□□ -0.1
TRIO-202ENST00000344204 PABPC3Q9H361 631 aaKnown RBP14.4□□□□□ -0.1
TRIO-202ENST00000344204 PRELID1Q9Y255 219 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 KRT6AP02538 564 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 KRT6BP04259 564 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 ATP2B4P23634 1241 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 LUZP2Q86TE4 346 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 RFFLQ8WZ73 363 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 ZNF18P17022 549 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 SHC4Q6S5L8 630 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 RBM41Q96IZ5 413 aaKnown RBP14.4□□□□□ -0.1
TRIO-202ENST00000344204 MARCOQ9UEW3 520 aaPredicted RBP14.4□□□□□ -0.1
TRIO-202ENST00000344204 RWDD3Q9Y3V2 267 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 FAM58BPP0C7Q3 252 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 ZAP70P43403 619 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 ARHGDIAP52565 204 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 TUBA4AP68366 448 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 FOXP3Q9BZS1 431 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 LRRC7Q96NW7 1537 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 CDC27P30260 824 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 RPAP3Q9H6T3 665 aaPredicted RBP14.4□□□□□ -0.1
TRIO-202ENST00000344204 GOLGA8CPA6NN73 597 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 CDC25AP30304 524 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 MRPS26Q9BYN8 205 aaKnown RBP14.4□□□□□ -0.1
TRIO-202ENST00000344204 SMIM31A0A1B0GVY4 71 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 THOC7Q6I9Y2 204 aaKnown RBP14.4□□□□□ -0.1
TRIO-202ENST00000344204 EDEM3Q9BZQ6 932 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 SLC13A1Q9BZW2 595 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 MANSC1Q9H8J5 431 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 TRIM49P0CI25 452 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 TRIM49CP0CI26 452 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 DMP1Q13316 513 aaPredicted RBP14.4□□□□□ -0.1
TRIO-202ENST00000344204 C1orf228Q6PIY5 440 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 ATXN2LQ8WWM7 1075 aaKnown RBP14.4□□□□□ -0.1
TRIO-202ENST00000344204 CAMSAP1Q5T5Y3 1602 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 MAST3O60307 1309 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 KLHL33A6NCF5 533 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 PCP11498 1178 aaKnown RBP14.4□□□□□ -0.1
TRIO-202ENST00000344204 MAEAQ7L5Y9 396 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 DAPK2Q9UIK4 370 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 LEMD3Q9Y2U8 911 aa14.4□□□□□ -0.1
TRIO-202ENST00000344204 DDHD2O94830 711 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 LRRC41Q15345 812 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 FAM25AB3EWG3 89 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 FAM25CB3EWG5 89 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 FAM25GB3EWG6 89 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 PDIA2Q13087 525 aaKnown RBP14.39□□□□□ -0.11
TRIO-202ENST00000344204 GPC5P78333 572 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 P3H1Q32P28 736 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 MKL2Q9ULH7 1088 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 GOLGA8TH3BQL2 631 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 TAC1P20366 129 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 KRT6CP48668 564 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 PLBD2Q8NHP8 589 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 NFIBO00712 420 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 KRT16P08779 473 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 DDX42Q86XP3 938 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRIO-202ENST00000344204 EPS8L3Q8TE67 593 aaKnown RBP14.39□□□□□ -0.11
TRIO-202ENST00000344204 PAPD7Q5XG87 772 aaKnown RBP14.39□□□□□ -0.11
TRIO-202ENST00000344204 TRIM67Q6ZTA4 783 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 SUPT20HQ8NEM7 779 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 PJA2O43164 708 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 AKAP10O43572 662 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 JAMLQ86YT9 394 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 VPS50Q96JG6 964 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 CNDP1Q96KN2 507 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 ACAP3Q96P50 834 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 ERP44Q9BS26 406 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 CCDC28BQ9BUN5 200 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 SUN2Q9UH99 717 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 POTEFA5A3E0 1075 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 DNALI1O14645 258 aaPredicted RBP14.39□□□□□ -0.11
TRIO-202ENST00000344204 CIITAP33076 1130 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 CLK1P49759 484 aaKnown RBP14.39□□□□□ -0.11
TRIO-202ENST00000344204 CCDC85BQ15834 202 aaPredicted RBP14.39□□□□□ -0.11
TRIO-202ENST00000344204 GRIP2Q9C0E4 1043 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 ZNF212Q9UDV6 495 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 ANAPC7Q9UJX3 599 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 PRR23D1E9PI22 279 aaPredicted RBP14.39□□□□□ -0.11
TRIO-202ENST00000344204 PRR23D2P0DMB1 279 aaPredicted RBP14.39□□□□□ -0.11
TRIO-202ENST00000344204 LRRC39Q96DD0 335 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 MCRS1Q96EZ8 462 aa14.39□□□□□ -0.11
TRIO-202ENST00000344204 TTC7AQ9ULT0 858 aaPredicted RBP14.39□□□□□ -0.11
TRIO-202ENST00000344204 A6NJR5 290 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 NBNO60934 754 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 RNF34Q969K3 372 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 ACCSLQ4AC99 568 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 UNC13DQ70J99 1090 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 ZNF277Q9NRM2 450 aaPredicted RBP14.38□□□□□ -0.11
TRIO-202ENST00000344204 PCM1Q15154 2024 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 FKBP6O75344 327 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 LIFRP42702 1097 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 LVRNQ6Q4G3 990 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 IFNL3Q8IZI9 196 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 DENND2AQ9ULE3 1009 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 HLA-DPA1P20036 260 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 CHN2P52757 468 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms