RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PKD2L1Q9P0L9 805 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 STAP2Q9UGK3 403 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 SLC4A2P04920 1241 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 HSPD1P10809 573 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 E2F5Q15329 346 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 ELP2Q6IA86 826 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 DGLUCYQ7Z3D6 616 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 SCFD2Q8WU76 684 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 BABAM1Q9NWV8 329 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 PCDHGA10Q9Y5H3 936 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 AK5Q9Y6K8 562 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 PFDN6O15212 129 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 DAPK3O43293 454 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 MARK3P27448 753 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 YAP1P46937 504 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 RHBDL3P58872 404 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 SPIRE1Q08AE8 756 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 C12orf56Q8IXR9 622 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 TMOD3Q9NYL9 352 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 EXOC7Q9UPT5 735 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 BTBD11A6QL63 1104 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 CCDC137Q6PK04 289 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 RASSF3Q86WH2 238 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 CAMKK1Q8N5S9 505 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 RHPN1Q8TCX5 695 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 PITPNM3Q9BZ71 974 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 ING2Q9H160 280 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 FARP1Q9Y4F1 1045 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 TGM6O95932 706 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PDHA1P08559 390 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 HNRNPFP52597 415 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 OR5T1Q8NG75 326 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 SNX18Q96RF0 628 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 TRIM51Q9BSJ1 452 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PARP3Q9Y6F1 533 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ATP8B3O60423 1300 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 KANSL1LA0AUZ9 987 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 WDR47O94967 919 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 MMRN1Q13201 1228 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 CCDC33Q8N5R6 958 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 MMS19Q96T76 1030 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ISCA1Q9BUE6 129 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ASCC2Q9H1I8 757 aaPredicted RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 RCOR1Q9UKL0 485 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ZBTB1Q9Y2K1 713 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 TCOF1Q13428 1488 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 CRABP2P29373 138 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 CEBPAP49715 358 aaPredicted RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PDCLQ13371 301 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 GRAMD1BQ3KR37 738 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ITIH5Q86UX2 942 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 NEDD1Q8NHV4 660 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 C7orf26Q96N11 449 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PCMTD2Q9NV79 361 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 CNOT7Q9UIV1 285 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PSMD14O00487 310 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 APOA4P06727 396 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 LSAMPQ13449 338 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 TPH2Q8IWU9 490 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 COX4I2Q96KJ9 171 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PMF1-BGLAPU3KQ54 211 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PODXLO00592 558 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 IARSP41252 1262 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 KCTD2Q14681 263 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 LBHQ53QV2 105 aaPredicted RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 DCP2Q8IU60 420 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 TTC16Q8NEE8 873 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 HAT1O14929 419 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ASMTP46597 345 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 SARSP49591 514 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PEX5P50542 639 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 EMC2Q15006 297 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 LRIF1Q5T3J3 769 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ENDOVQ8N8Q3 282 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 HSPH1Q92598 858 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 MND1Q9BWT6 205 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ZC3H12CQ9C0D7 883 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 BAIAP2Q9UQB8 552 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 SLC4A4Q9Y6R1 1079 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 IRS2Q9Y4H2 1338 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 TRAPPC3LQ5T215 181 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 SIX5Q8N196 739 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 CDH19Q9H159 772 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 DPH5Q9H2P9 285 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 MLXQ9UH92 298 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 CCDC194A0A1B0GVG4 234 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 AP3B1O00203 1094 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 TRAPPC3O43617 180 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 TYSND1Q2T9J0 566 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ALKBH8Q96BT7 664 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 SEZ6LQ9BYH1 1024 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PPANQ9NQ55 473 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 PUF60Q9UHX1 559 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 TMEM5Q9Y2B1 443 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 CCDC154A6NI56 674 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 NBNO60934 754 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 BBOX1O75936 387 aa3.97□□□□□ -1.77
SYNE2-202ENST00000344113 SEC31AO94979 1220 aaKnown RBP3.97□□□□□ -1.77
SYNE2-202ENST00000344113 ACAD9Q9H845 621 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms