RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 COPB2P35606 906 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 CASP2P42575 452 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 AARSP49588 968 aaKnown RBP eCLIP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 CARSP49589 748 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 ARL4CP56559 192 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 TMPRSS15P98073 1019 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 KRT76Q01546 638 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 KRT17Q04695 432 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 RNASELQ05823 741 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 C16orf86Q6ZW13 317 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 RHPN2Q8IUC4 686 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 SIX6OS1Q8N1H7 587 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 LRRC43Q8N309 656 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 RBM41Q96IZ5 413 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 FAM193BQ96PV7 902 aaPredicted RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 MTRQ99707 1265 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 SLITRK6Q9H5Y7 841 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 JMJD4Q9H9V9 463 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 PAPOLBQ9NRJ5 636 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 SEL1LQ9UBV2 794 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 MAP2P11137 1827 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 PDS5AQ29RF7 1337 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 KIDINS220Q9ULH0 1771 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 PIK3R2O00459 728 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 ATMINO43313 823 aaPredicted RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 RAD51CO43502 376 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 ZWINTO95229 277 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 ARPP19P56211 112 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 PDIA2Q13087 525 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 DALRD3Q5D0E6 543 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 PPP1R2P3Q6NXS1 205 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 CDC42EP5Q6NZY7 148 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 ADGRA1Q86SQ6 560 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 TRIM42Q8IWZ5 723 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 SP8Q8IXZ3 490 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 TGS1Q96RS0 853 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 PRMT1Q99873 361 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 CELF4Q9BZC1 486 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 ALG13Q9NP73 1137 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 ZNF302Q9NR11 478 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 ZFATQ9P243 1243 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 PPARGC1AQ9UBK2 798 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 UBE4BO95155 1302 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 YWHABP31946 246 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 PSMC5P62195 406 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 MAPK6Q16659 721 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 MORC4Q8TE76 937 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 NSUN6Q8TEA1 469 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 CPA5Q8WXQ8 436 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 TLK1Q9UKI8 766 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 AFF2P51816 1311 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 IGF2BP3O00425 579 aaKnown RBP eCLIP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 COPEO14579 308 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 XPOTO43592 962 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 CHN1P15882 459 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 KLRC1P26715 233 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 CDC25CP30307 473 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 EPHA7Q15375 998 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 GPR162Q16538 588 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 ANKRD20A8PQ5CZ79 823 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 IZUMO3Q5VZ72 239 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 TRPM8Q7Z2W7 1104 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 MMGT1Q8N4V1 131 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 ZNF513Q8N8E2 541 aaPredicted RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 XPO6Q96QU8 1125 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 DLGAP2Q9P1A6 1054 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 ANGPTL2Q9UKU9 493 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 HPSEQ9Y251 543 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 MROH2AA6NES4 1674 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 M0QYV0 167 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 DNAJC8O75937 253 aaPredicted RBP8.56□□□□□ -1.04
UBE4B-202ENST00000343090 FMO5P49326 533 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 PSMC1P62191 440 aaKnown RBP8.56□□□□□ -1.04
UBE4B-202ENST00000343090 CCNA1P78396 465 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 MRPS35P82673 323 aaKnown RBP8.56□□□□□ -1.04
UBE4B-202ENST00000343090 SLC12A1Q13621 1099 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 ARHGAP18Q8N392 663 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 FBXL13Q8NEE6 735 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 SKA2Q8WVK7 121 aaPredicted RBP8.56□□□□□ -1.04
UBE4B-202ENST00000343090 PPWD1Q96BP3 646 aaKnown RBP8.56□□□□□ -1.04
UBE4B-202ENST00000343090 EDEM3Q9BZQ6 932 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 WNT8AQ9H1J5 351 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 RBAKQ9NYW8 714 aaPredicted RBP8.56□□□□□ -1.04
UBE4B-202ENST00000343090 HSPBP1Q9NZL4 362 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 RXRBP28702 533 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 LRIG3Q6UXM1 1119 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 MYLK4Q86YV6 388 aaPredicted RBP8.56□□□□□ -1.04
UBE4B-202ENST00000343090 ANKMY2Q8IV38 441 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 HOMEZQ8IX15 550 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 RYBPQ8N488 228 aaPredicted RBP8.56□□□□□ -1.04
UBE4B-202ENST00000343090 PPM1NQ8N819 430 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 SNF8Q96H20 258 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 APEX2Q9UBZ4 518 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 CD163L1Q9NR16 1453 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 FAM187AA6NFU0 413 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 TRPA1O75762 1119 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 ABCD1P33897 745 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 ACOT2P49753 483 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 GPC3P51654 580 aa8.56□□□□□ -1.04
UBE4B-202ENST00000343090 SURF1Q15526 300 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms