RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 USH1CQ9Y6N9 552 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 UBE4BO95155 1302 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 SPDYE5A6NIY4 337 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 AP1G2O75843 785 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 GNAT1P11488 350 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 GAP43P17677 238 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 ITIH2P19823 946 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 IVDP26440 423 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 CHKAP35790 457 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 STAT3P40763 770 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 CAV1Q03135 178 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 KLC1Q07866 573 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 ZNF543Q08ER8 600 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 PTK6Q13882 451 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 SETDB1Q15047 1291 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 TMEM63BQ5T3F8 832 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 IRGCQ6NXR0 463 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 MTHFD1LQ6UB35 978 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 CCDC25Q86WR0 208 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 RIBC1Q8N443 379 aaPredicted RBP10.35□□□□□ -0.75
HOXA1-201ENST00000343060 VTI1AQ96AJ9 217 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 ERP27Q96DN0 273 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 SYT15Q9BQS2 421 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 GLT8D2Q9H1C3 349 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 DNAJC18Q9H819 358 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 MLXIPLQ9NP71 852 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 KCNK9Q9NPC2 374 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 MTMR4Q9NYA4 1195 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 NKIRAS1Q9NYS0 192 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 CTTNBP2NLQ9P2B4 639 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 DNM3Q9UQ16 869 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 JAG2Q9Y219 1238 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 PCDHB13Q9Y5F0 798 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 GREB1LQ9C091 1923 aaPredicted RBP10.35□□□□□ -0.75
HOXA1-201ENST00000343060 ZNF831Q5JPB2 1677 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 SIGLEC16A6NMB1 481 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 UBAP1LF5GYI3 381 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 TBX3O15119 743 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 SORBS3O60504 671 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 CDH16O75309 829 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 RTN3O95197 1032 aaPredicted RBP10.35□□□□□ -0.75
HOXA1-201ENST00000343060 LMNAP02545 664 aaKnown RBP10.35□□□□□ -0.75
HOXA1-201ENST00000343060 T-ENOLP0DO92 83 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 MUTP22033 750 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 SP100P23497 879 aaPredicted RBP10.35□□□□□ -0.75
HOXA1-201ENST00000343060 SLC18A1P54219 525 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 PSMC6P62333 389 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 GPC5P78333 572 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 GRIK5Q16478 980 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 TSNAXIP1Q2TAA8 658 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 CBWD6Q4V339 395 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 CBWD3Q5JTY5 395 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 CBWD5Q5RIA9 395 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 ADGRF4Q8IZF3 695 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 CYP4X1Q8N118 509 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 KCTD17Q8N5Z5 321 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 FBXO41Q8TF61 875 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 TEKT4Q8WW24 435 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 NLRP3Q96P20 1036 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 NUDCD1Q96RS6 583 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 RUSC1Q9BVN2 902 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 PITPNM3Q9BZ71 974 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 DMAC2Q9NW81 257 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 NINJ2Q9NZG7 142 aa10.35□□□□□ -0.75
HOXA1-201ENST00000343060 TAF1LQ8IZX4 1826 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 LOC102724428A0A0B4J2F2 783 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 RSPH10B2B2RC85 870 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 FSCN2O14926 492 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 CLIC2O15247 247 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 MAP3K13O43283 966 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 DCTN3O75935 186 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 ASMTLO95671 621 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 RSPH10BP0C881 870 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 CETPP11597 493 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 ALDH3A1P30838 453 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 PTDSS1P48651 473 aaKnown RBP10.34□□□□□ -0.75
HOXA1-201ENST00000343060 SIK1P57059 783 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 WDR4P57081 412 aaKnown RBP10.34□□□□□ -0.75
HOXA1-201ENST00000343060 MXRA7P84157 204 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 IL9RQ01113 521 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 KRT17Q04695 432 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 PABPC4Q13310 644 aaKnown RBP eCLIP10.34□□□□□ -0.75
HOXA1-201ENST00000343060 PDCD2Q16342 344 aaPredicted RBP10.34□□□□□ -0.75
HOXA1-201ENST00000343060 TRIM68Q6AZZ1 485 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 RNF207Q6ZRF8 634 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 ERMNQ8TAM6 284 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 LMO3Q8TAP4 145 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 PSPC1Q8WXF1 523 aaKnown RBP10.34□□□□□ -0.75
HOXA1-201ENST00000343060 DNAJC9Q8WXX5 260 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 SNF8Q96H20 258 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 ZNF333Q96JL9 665 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 TBC1D10AQ9BXI6 508 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 ZBTB5O15062 677 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 GCNT3O95395 438 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 FTLP02792 175 aaPredicted RBP10.34□□□□□ -0.75
HOXA1-201ENST00000343060 ABHD2P08910 425 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 MAN1A1P33908 653 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 PCK1P35558 622 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 KCNJ1P48048 391 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 KCNA1Q09470 495 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms