RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 RGS2P41220 211 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 TAS2R42Q7RTR8 314 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 TRIM51Q9BSJ1 452 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 PHACTR1Q9C0D0 580 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 HMG20AQ9NP66 347 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 CCDC87Q9NVE4 849 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 CDYLQ9Y232 598 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 STX4Q12846 297 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 TRIP13Q15645 432 aaPredicted RBP18.57■□□□□ 0.56
SMAD4-201ENST00000342988 TIGD7Q6NT04 549 aaPredicted RBP18.57■□□□□ 0.56
SMAD4-201ENST00000342988 KLHL17Q6TDP4 642 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 OR8H2Q8N162 312 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 SERPINB13Q9UIV8 391 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 FRMPD2Q68DX3 1309 aaPredicted RBP18.57■□□□□ 0.56
SMAD4-201ENST00000342988 PSMD14O00487 310 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 ZNF24P17028 368 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 OR6P1Q8NGX9 317 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 RBBP8Q99708 897 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 UNC45AQ9H3U1 944 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 HEY1Q9Y5J3 304 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 GSPT1P15170 499 aaKnown RBP18.57■□□□□ 0.56
SMAD4-201ENST00000342988 EFL1Q7Z2Z2 1120 aaKnown RBP18.57■□□□□ 0.56
SMAD4-201ENST00000342988 FAM133AQ8N9E0 248 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 ADI1Q9BV57 179 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 ZBTB1Q9Y2K1 713 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 SH3TC1Q8TE82 1336 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 ROR1Q01973 937 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 C6orf10Q5SRN2 563 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 STAP1Q9ULZ2 295 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 SH3GLB1Q9Y371 365 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 ZMYND10O75800 440 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 CTDSPL2Q05D32 466 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 Q3C1V9 767 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 YAF2Q8IY57 180 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 KBTBD3Q8NAB2 608 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 HDAC6Q9UBN7 1215 aa18.57■□□□□ 0.56
SMAD4-201ENST00000342988 TNFAIP2Q03169 654 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 ADRM1Q16186 407 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 ELMO2Q96JJ3 720 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 TBXAS1P24557 533 aaPredicted RBP18.56■□□□□ 0.56
SMAD4-201ENST00000342988 ACADLP28330 430 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 EIF2S3P41091 472 aaKnown RBP18.56■□□□□ 0.56
SMAD4-201ENST00000342988 USP14P54578 494 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 ALDH6A1Q02252 535 aaKnown RBP18.56■□□□□ 0.56
SMAD4-201ENST00000342988 ZNF658Q5TYW1 1059 aaPredicted RBP18.56■□□□□ 0.56
SMAD4-201ENST00000342988 C10orf53Q8N6V4 93 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 MCRS1Q96EZ8 462 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 SNF8Q96H20 258 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 MXI1P50539 228 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 YWHAZP63104 245 aaKnown RBP18.56■□□□□ 0.56
SMAD4-201ENST00000342988 SDE2Q6IQ49 451 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 ZNF438Q7Z4V0 828 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 RASSF5Q8WWW0 418 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 CFAP43Q8NDM7 1665 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 TBKBP1A7MCY6 615 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 ASNA1O43681 348 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 CNTN1Q12860 1018 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 IDI1Q13907 227 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 GPR141Q7Z602 305 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 KCNV2Q8TDN2 545 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 SYNDIG1Q9H7V2 258 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 ADGRA3Q8IWK6 1321 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 TRIM65Q6PJ69 517 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 MRPL50Q8N5N7 158 aaKnown RBP18.56■□□□□ 0.56
SMAD4-201ENST00000342988 GLMNQ92990 594 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 DCAF5Q96JK2 942 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 THRAP3Q9Y2W1 955 aaKnown RBP18.56■□□□□ 0.56
SMAD4-201ENST00000342988 ARMC6Q6NXE6 501 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 ARL8AQ96BM9 186 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 ARMC7Q9H6L4 198 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 FGGP02679 453 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 PPARAQ07869 468 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 MTFR1Q15390 333 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 RAD18Q9NS91 495 aa18.56■□□□□ 0.56
SMAD4-201ENST00000342988 ALDH1A1P00352 501 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 TYK2P29597 1187 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 RABGAP1LQ5R372 815 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 C8orf37Q96NL8 207 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 PCDHGA4Q9Y5G9 962 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 PSAPP07602 524 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 SLC7A5Q01650 507 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 TMA16Q96EY4 203 aaKnown RBP18.55■□□□□ 0.56
SMAD4-201ENST00000342988 VMP1Q96GC9 406 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 MAML3Q96JK9 1138 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 TOPORSQ9NS56 1045 aaPredicted RBP18.55■□□□□ 0.56
SMAD4-201ENST00000342988 WWP2O00308 870 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 MTHFD1LQ6UB35 978 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 SEPT1Q8WYJ6 367 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 PPCSQ9HAB8 311 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 CTNNAL1Q9UBT7 734 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 KLHL2O95198 593 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 NGRNQ9NPE2 291 aaKnown RBP18.55■□□□□ 0.56
SMAD4-201ENST00000342988 ZNF618Q5T7W0 954 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 ZNF507Q8TCN5 953 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 VAV3Q9UKW4 847 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 hCG_1984214I3L0E3 225 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 EYA2O00167 538 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 TSPAN9O75954 239 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 TTC23Q5W5X9 447 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 CAMK1DQ8IU85 385 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms