RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 RAB21Q9UL25 225 aa14.43□□□□□ -0.1
TMEM248-201ENST00000341567 DISP2A7MBM2 1401 aa14.43□□□□□ -0.1
TMEM248-201ENST00000341567 TISP43B9A030 160 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 PI4K2BG5E9Z4 385 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 TXNP10599 105 aaKnown RBP14.42□□□□□ -0.1
TMEM248-201ENST00000341567 POLR2BP30876 1174 aaKnown RBP14.42□□□□□ -0.1
TMEM248-201ENST00000341567 ORC2Q13416 577 aaPredicted RBP14.42□□□□□ -0.1
TMEM248-201ENST00000341567 C1orf54Q8WWF1 131 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 SPDL1Q96EA4 605 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 CYFIP2Q96F07 1278 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 RPF1Q9H9Y2 349 aaKnown RBP14.42□□□□□ -0.1
TMEM248-201ENST00000341567 DDNO94850 711 aaPredicted RBP14.42□□□□□ -0.1
TMEM248-201ENST00000341567 SLC18A3Q16572 532 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 HADHQ16836 314 aaKnown RBP14.42□□□□□ -0.1
TMEM248-201ENST00000341567 RFX6Q8HWS3 928 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 NUP85Q9BW27 656 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 EXOC1LA0A1B0GW35 172 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 I3L4J1 428 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 SOX5P35711 763 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 PSMC4P43686 418 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 MDM2Q00987 491 aaPredicted RBP14.42□□□□□ -0.1
TMEM248-201ENST00000341567 PRKCEQ02156 737 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 SYT2Q8N9I0 419 aaPredicted RBP14.42□□□□□ -0.1
TMEM248-201ENST00000341567 PLAGL2Q9UPG8 496 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 CLGNO14967 610 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 OPHN1O60890 802 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 BASP1P80723 227 aaKnown RBP14.42□□□□□ -0.1
TMEM248-201ENST00000341567 GIT2Q14161 759 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 MED1Q15648 1581 aaPredicted RBP14.42□□□□□ -0.1
TMEM248-201ENST00000341567 SNRNP35Q16560 246 aaKnown RBP14.42□□□□□ -0.1
TMEM248-201ENST00000341567 FRMD5Q7Z6J6 570 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 CBWD2Q8IUF1 395 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 APOBEC3FQ8IUX4 373 aaKnown RBP14.42□□□□□ -0.1
TMEM248-201ENST00000341567 KIF2BQ8N4N8 673 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 PPP1R13LQ8WUF5 828 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 TSNARE1Q96NA8 513 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 DUSP9Q99956 384 aaKnown RBP14.42□□□□□ -0.1
TMEM248-201ENST00000341567 ETNK1Q9HBU6 452 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 TMX2Q9Y320 296 aa14.42□□□□□ -0.1
TMEM248-201ENST00000341567 MAP2K7O14733 419 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 GLI1P08151 1106 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 BRAFP15056 766 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 MAN1A1P33908 653 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 GPC5P78333 572 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 ARHGEF18Q6ZSZ5 1173 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 PDCD7Q8N8D1 485 aaKnown RBP14.41□□□□□ -0.1
TMEM248-201ENST00000341567 FBXL13Q8NEE6 735 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 OR6B3Q8NGW1 331 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 HSPH1Q92598 858 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 FAM84AQ96KN4 292 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 TUFT1Q9NNX1 390 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 DBR1Q9UK59 544 aaKnown RBP14.41□□□□□ -0.1
TMEM248-201ENST00000341567 PTGISQ16647 500 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 ERICH1Q86X53 443 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 LPAR1Q92633 364 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 SEC16BQ96JE7 1060 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 MRC1P22897 1456 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 PDE2AO00408 941 aaPredicted RBP14.41□□□□□ -0.1
TMEM248-201ENST00000341567 TLR3O15455 904 aaKnown RBP14.41□□□□□ -0.1
TMEM248-201ENST00000341567 VCAM1P19320 739 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 ADCY2Q08462 1091 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 SLMAPQ14BN4 828 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 RAB3IL1Q8TBN0 382 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 MYCBPAPQ8TBZ2 947 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 ZNF564Q8TBZ8 553 aaPredicted RBP14.41□□□□□ -0.1
TMEM248-201ENST00000341567 SPC25Q9HBM1 224 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 ARHGAP20Q9P2F6 1191 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 SEL1LQ9UBV2 794 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 USH1CQ9Y6N9 552 aa14.41□□□□□ -0.1
TMEM248-201ENST00000341567 LTN1O94822 1766 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 SLIT3O75094 1523 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 MYBL2P10244 700 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 KCNJ1P48048 391 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 YWHAGP61981 247 aaKnown RBP eCLIP14.4□□□□□ -0.1
TMEM248-201ENST00000341567 WDR72Q3MJ13 1102 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 CENPPQ6IPU0 288 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 ARHGAP24Q8N264 748 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 MMGT1Q8N4V1 131 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 MAIP1Q8WWC4 291 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 NACA2Q9H009 215 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 SLC40A1Q9NP59 571 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 DCTN4Q9UJW0 460 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 SFNP31947 248 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 MSH2P43246 934 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 CASP5P51878 434 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 TKFCQ3LXA3 575 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 ZNF667Q5HYK9 610 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 CCNYQ8ND76 341 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 FAM163AQ96GL9 167 aaPredicted RBP14.4□□□□□ -0.1
TMEM248-201ENST00000341567 PRMT1Q99873 361 aaKnown RBP14.4□□□□□ -0.1
TMEM248-201ENST00000341567 AGPAT3Q9NRZ7 376 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 ABT1Q9ULW3 272 aaKnown RBP14.4□□□□□ -0.1
TMEM248-201ENST00000341567 CHN1P15882 459 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 SMARCA1P28370 1054 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 ZNF699Q32M78 642 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 PAPD7Q5XG87 772 aaKnown RBP14.4□□□□□ -0.1
TMEM248-201ENST00000341567 SLC35G2Q8TBE7 412 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 GRK7Q8WTQ7 553 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 CASKIN2Q8WXE0 1202 aa14.4□□□□□ -0.1
TMEM248-201ENST00000341567 TOPORSQ9NS56 1045 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms