RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 ENPEPQ07075 957 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 RAPGEF1Q13905 1077 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 MFSD10Q14728 455 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 IFNLR1Q8IU57 520 aaPredicted RBP23.02■■□□□ 1.28
VRK2-201ENST00000340157 CCDC170Q8IYT3 715 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 KIAA0319LQ8IZA0 1049 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 EHBP1Q8NDI1 1231 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 AP5M1Q9H0R1 490 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 KIAA1586Q9HCI6 787 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 RNF186Q9NXI6 227 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 AKT3Q9Y243 479 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 A0A087WZ62 844 aa23.01■■□□□ 1.27
VRK2-201ENST00000340157 INO80B-WBP1J3KQ70 363 aa23.01■■□□□ 1.27
VRK2-201ENST00000340157 ACKR2O00590 384 aa23.01■■□□□ 1.27
VRK2-201ENST00000340157 PROZP22891 400 aa23.01■■□□□ 1.27
VRK2-201ENST00000340157 FSCN1Q16658 493 aaKnown RBP23.01■■□□□ 1.27
VRK2-201ENST00000340157 ASTE1Q2TB18 679 aaPredicted RBP23.01■■□□□ 1.27
VRK2-201ENST00000340157 PHLDB3Q6NSJ2 640 aa23.01■■□□□ 1.27
VRK2-201ENST00000340157 FDXACB1Q9BRP7 624 aaPredicted RBP23.01■■□□□ 1.27
VRK2-201ENST00000340157 INO80BQ9C086 356 aaPredicted RBP23.01■■□□□ 1.27
VRK2-201ENST00000340157 PTPRHQ9HD43 1115 aa23.01■■□□□ 1.27
VRK2-201ENST00000340157 DNAH12Q6ZR08 3092 aa23.01■■□□□ 1.27
VRK2-201ENST00000340157 FANCGO15287 622 aa23■■□□□ 1.27
VRK2-201ENST00000340157 DUSP11O75319 330 aaKnown RBP23■■□□□ 1.27
VRK2-201ENST00000340157 CSDE1O75534 798 aaKnown RBP23■■□□□ 1.27
VRK2-201ENST00000340157 ARHGAP25P42331 645 aa23■■□□□ 1.27
VRK2-201ENST00000340157 CHMP4BP1P59074 171 aa23■■□□□ 1.27
VRK2-201ENST00000340157 CLDN10P78369 228 aa23■■□□□ 1.27
VRK2-201ENST00000340157 MAP2K1Q02750 393 aaPredicted RBP23■■□□□ 1.27
VRK2-201ENST00000340157 PSMD6Q15008 389 aa23■■□□□ 1.27
VRK2-201ENST00000340157 SEZ6Q53EL9 994 aa23■■□□□ 1.27
VRK2-201ENST00000340157 MFSD14CQ5VZR4 134 aa23■■□□□ 1.27
VRK2-201ENST00000340157 TSHZ1Q6ZSZ6 1077 aa23■■□□□ 1.27
VRK2-201ENST00000340157 ZNF516Q92618 1163 aa23■■□□□ 1.27
VRK2-201ENST00000340157 SEMA4DQ92854 862 aa23■■□□□ 1.27
VRK2-201ENST00000340157 GPR88Q9GZN0 384 aa23■■□□□ 1.27
VRK2-201ENST00000340157 APEX2Q9UBZ4 518 aa23■■□□□ 1.27
VRK2-201ENST00000340157 PTPRJQ12913 1337 aa23■■□□□ 1.27
VRK2-201ENST00000340157 EIF3CLB5ME19 914 aaKnown RBP23■■□□□ 1.27
VRK2-201ENST00000340157 CLDN3O15551 220 aa23■■□□□ 1.27
VRK2-201ENST00000340157 TRPA1O75762 1119 aa23■■□□□ 1.27
VRK2-201ENST00000340157 MYL3P08590 195 aa23■■□□□ 1.27
VRK2-201ENST00000340157 PNMA6AP0CW24 399 aaPredicted RBP23■■□□□ 1.27
VRK2-201ENST00000340157 DLATP10515 647 aaKnown RBP23■■□□□ 1.27
VRK2-201ENST00000340157 TMOD1P28289 359 aa23■■□□□ 1.27
VRK2-201ENST00000340157 MATR3P43243 847 aaKnown RBP eCLIP23■■□□□ 1.271e-12■■■■■ 44.7
VRK2-201ENST00000340157 PSEN2P49810 448 aa23■■□□□ 1.27
VRK2-201ENST00000340157 ADAM17P78536 824 aa23■■□□□ 1.27
VRK2-201ENST00000340157 MAPK8IP2Q13387 824 aaPredicted RBP23■■□□□ 1.27
VRK2-201ENST00000340157 AMHR2Q16671 573 aa23■■□□□ 1.27
VRK2-201ENST00000340157 NFRKBQ6P4R8 1299 aa23■■□□□ 1.27
VRK2-201ENST00000340157 IRF2BP2Q7Z5L9 587 aa23■■□□□ 1.27
VRK2-201ENST00000340157 EIF3CQ99613 913 aaKnown RBP23■■□□□ 1.27
VRK2-201ENST00000340157 TMEM8AQ9HCN3 771 aa23■■□□□ 1.27
VRK2-201ENST00000340157 MYO6Q9UM54 1294 aa23■■□□□ 1.27
VRK2-201ENST00000340157 COQ4Q9Y3A0 265 aa23■■□□□ 1.27
VRK2-201ENST00000340157 SCN10AQ9Y5Y9 1956 aa22.99■■□□□ 1.27
VRK2-201ENST00000340157 NRCAMQ92823 1304 aa22.99■■□□□ 1.27
VRK2-201ENST00000340157 MBLAC1A4D2B0 266 aaPredicted RBP22.99■■□□□ 1.27
VRK2-201ENST00000340157 GOLGA6L9A6NEM1 432 aa22.99■■□□□ 1.27
VRK2-201ENST00000340157 RRN3P2A6NIE6 340 aa22.99■■□□□ 1.27
VRK2-201ENST00000340157 HARSP12081 509 aaKnown RBP22.99■■□□□ 1.27
VRK2-201ENST00000340157 CYLC1P35663 651 aaPredicted RBP22.99■■□□□ 1.27
VRK2-201ENST00000340157 PHKA2P46019 1235 aa22.99■■□□□ 1.27
VRK2-201ENST00000340157 PURAQ00577 322 aaKnown RBP22.99■■□□□ 1.27
VRK2-201ENST00000340157 MCL1Q07820 350 aa22.99■■□□□ 1.27
VRK2-201ENST00000340157 ZBTB33Q86T24 672 aa22.99■■□□□ 1.27
VRK2-201ENST00000340157 CCDC42Q96M95 316 aa22.99■■□□□ 1.27
VRK2-201ENST00000340157 SPAG5Q96R06 1193 aa22.99■■□□□ 1.27
VRK2-201ENST00000340157 PDE11AQ9HCR9 933 aa22.99■■□□□ 1.27
VRK2-201ENST00000340157 LZTFL1Q9NQ48 299 aa22.99■■□□□ 1.27
VRK2-201ENST00000340157 DNAJC12Q9UKB3 198 aa22.99■■□□□ 1.27
VRK2-201ENST00000340157 CNTNAP2Q9UHC6 1331 aa22.99■■□□□ 1.27
VRK2-201ENST00000340157 SSU72P8A0A1W2PR75 194 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 SERPING1P05155 500 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 GTF2H1P32780 548 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 TNFSF9P41273 254 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 VEGFBP49765 207 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 GPC3P51654 580 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 KIF11P52732 1056 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 CYP27A1Q02318 531 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 ARID5AQ03989 594 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 CACNB2Q08289 660 aaPredicted RBP22.98■■□□□ 1.27
VRK2-201ENST00000340157 PRPF4BQ13523 1007 aaKnown RBP22.98■■□□□ 1.27
VRK2-201ENST00000340157 FAM187BQ17R55 369 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 EEF1DP3Q658K8 133 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 KRT39Q6A163 491 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 C15orf39Q6ZRI6 1047 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 SV2AQ7L0J3 742 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 ARHGEF19Q8IW93 802 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 RBAKQ9NYW8 714 aaPredicted RBP22.98■■□□□ 1.27
VRK2-201ENST00000340157 TFR2Q9UP52 801 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 R3HCC1Q9Y3T6 440 aaKnown RBP22.98■■□□□ 1.27
VRK2-201ENST00000340157 LCA5LO95447 670 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 LDHAP00338 332 aaKnown RBP22.98■■□□□ 1.27
VRK2-201ENST00000340157 ETF1P62495 437 aaKnown RBP22.98■■□□□ 1.27
VRK2-201ENST00000340157 HTRA3P83110 453 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 ASIC2Q16515 512 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 SLC9C1Q4G0N8 1177 aa22.98■■□□□ 1.27
VRK2-201ENST00000340157 ATF7IP2Q5U623 682 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms