RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.73■□□□□ 0.27
UBE3B-201ENST00000340074 FAM237AA0A1B0GTK4 181 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 ARL5CA6NH57 179 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 ACTN4O43707 911 aaKnown RBP16.73■□□□□ 0.27
UBE3B-201ENST00000340074 SLC34A2O95436 690 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 SCP2P22307 547 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 MLH1P40692 756 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 AFMP43652 599 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 GTF2BQ00403 316 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 ZNF568Q3ZCX4 644 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 ZC2HC1CQ53FD0 456 aaPredicted RBP16.73■□□□□ 0.27
UBE3B-201ENST00000340074 HERC4Q5GLZ8 1057 aaPredicted RBP16.73■□□□□ 0.27
UBE3B-201ENST00000340074 ZNF720Q7Z2F6 126 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 ZBTB33Q86T24 672 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 COLGALT1Q8NBJ5 622 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 URGCPQ8TCY9 931 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 RSPH1Q8WYR4 309 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 MRPS27Q92552 414 aaKnown RBP16.73■□□□□ 0.27
UBE3B-201ENST00000340074 ZBTB45Q96K62 511 aaPredicted RBP16.73■□□□□ 0.27
UBE3B-201ENST00000340074 C11orf84Q9BUA3 381 aaPredicted RBP16.73■□□□□ 0.27
UBE3B-201ENST00000340074 GOLPH3LQ9H4A5 285 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 MRPL44Q9H9J2 332 aaKnown RBP16.73■□□□□ 0.27
UBE3B-201ENST00000340074 AAASQ9NRG9 546 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 SNTG2Q9NY99 539 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 KLK14Q9P0G3 267 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 SEL1LQ9UBV2 794 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 PARP2Q9UGN5 583 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 GIT1Q9Y2X7 761 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 PCDHB12Q9Y5F1 795 aa16.73■□□□□ 0.27
UBE3B-201ENST00000340074 POMCP01189 267 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 SLFN14P0C7P3 912 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 LAG3P18627 525 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 PROZP22891 400 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 CASP1P29466 404 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 PBX3P40426 434 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 SYKP43405 635 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 ASIC1P78348 528 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 RNASELQ05823 741 aaKnown RBP16.72■□□□□ 0.27
UBE3B-201ENST00000340074 MPZL3Q6UWV2 235 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 ZPBP2Q6X784 338 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 CCDC65Q8IXS2 484 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 GRAMD1CQ8IYS0 662 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 KLHL23Q8NBE8 558 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 SLC17A8Q8NDX2 589 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 BICD1Q96G01 975 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 ZFP42Q96MM3 310 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 C7orf25Q9BPX7 421 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 TCHPQ9BT92 498 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 CDT1Q9H211 546 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 BLZF1Q9H2G9 400 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 ST6GALNAC4Q9H4F1 302 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 ALG13Q9NP73 1137 aaKnown RBP16.72■□□□□ 0.27
UBE3B-201ENST00000340074 MTCH2Q9Y6C9 303 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 ANK1P16157 1881 aa16.72■□□□□ 0.27
UBE3B-201ENST00000340074 ABLIM1O14639 778 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 GTPBP6O43824 516 aaPredicted RBP16.71■□□□□ 0.27
UBE3B-201ENST00000340074 ZC3H11AO75152 810 aaKnown RBP eCLIP16.71■□□□□ 0.27
UBE3B-201ENST00000340074 TOM1L1O75674 476 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 RECQL4O94761 1208 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 POU3F3P20264 500 aaPredicted RBP16.71■□□□□ 0.27
UBE3B-201ENST00000340074 ABCD1P33897 745 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 COASYQ13057 564 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 CNNM4Q6P4Q7 775 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 KCNT2Q6UVM3 1135 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 APBB1IPQ7Z5R6 666 aaPredicted RBP16.71■□□□□ 0.27
UBE3B-201ENST00000340074 ZNF280BQ86YH2 543 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 CEP120Q8N960 986 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 P2RX5Q93086 422 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 PAGE5Q96GU1 130 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 GBP3Q9H0R5 595 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 NRDE2Q9H7Z3 1164 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 TSHZ2Q9NRE2 1034 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 OLFML3Q9NRN5 406 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 MIOSQ9NXC5 875 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 KANSL3Q9P2N6 904 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 ANKFY1Q9P2R3 1169 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 USP25Q9UHP3 1055 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 PLAGL2Q9UPG8 496 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 GDAQ9Y2T3 454 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 XIRP2A4UGR9 3374 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 UNC80Q8N2C7 3258 aa16.71■□□□□ 0.27
UBE3B-201ENST00000340074 GOLGA6L4A6NEF3 574 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 HNRNPDLO14979 420 aaKnown RBP16.7■□□□□ 0.26
UBE3B-201ENST00000340074 GRM6O15303 877 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 INPPL1O15357 1258 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 B4GALT3O60512 393 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 PPP1R37O75864 691 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 DDHD2O94830 711 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 GCNT3O95395 438 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 ITGB1P05556 798 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 HARSP12081 509 aaKnown RBP16.7■□□□□ 0.26
UBE3B-201ENST00000340074 LIG4P49917 911 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 SCNN1GP51170 649 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 CASP5P51878 434 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 BCAR1P56945 870 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 CUL4BQ13620 913 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 MAP4K3Q8IVH8 894 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 MICALL1Q8N3F8 863 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 GSTCDQ8NEC7 633 aa16.7■□□□□ 0.26
UBE3B-201ENST00000340074 MAFAQ8NHW3 353 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms