RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 HAPLN2Q9GZV7 340 aa19.53■□□□□ 0.72
SDCBP2-201ENST00000339987 HSPBP1Q9NZL4 362 aa19.53■□□□□ 0.72
SDCBP2-201ENST00000339987 SMTNL1A8MU46 457 aa19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 CETN3O15182 167 aa19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 FGFR1OPO95684 399 aaKnown RBP19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 PFKMP08237 780 aa19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 MATR3P43243 847 aaKnown RBP eCLIP19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 ADAM9Q13443 819 aa19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 NCAPHQ15003 741 aa19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 UBXN11Q5T124 520 aa19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 DHX40Q8IX18 779 aaKnown RBP19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 AOPEPQ8N6M6 819 aa19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 XXYLT1Q8NBI6 393 aa19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 NOC3LQ8WTT2 800 aaKnown RBP19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 DPF3Q92784 378 aa19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 VWCEQ96DN2 955 aa19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 FBXL18Q96ME1 805 aa19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 MSTO1Q9BUK6 570 aa19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 AGO2Q9UKV8 859 aaKnown RBP19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 LTBP2Q14767 1821 aa19.52■□□□□ 0.72
SDCBP2-201ENST00000339987 OGTO15294 1046 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 FAM189A1O60320 539 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 MGEA5O60502 916 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 LDHAP00338 332 aaKnown RBP19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 CYP2J2P51589 502 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 KYAT1Q16773 422 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 TPD52L1Q16890 204 aaPredicted RBP19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 TWF2Q6IBS0 349 aaKnown RBP19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 CNKSR3Q6P9H4 555 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 ZBTB33Q86T24 672 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 RPUSD2Q8IZ73 545 aaKnown RBP19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 ADAM2Q99965 735 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 EIF2AQ9BY44 585 aaKnown RBP19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 PCIF1Q9H4Z3 704 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 KIAA1586Q9HCI6 787 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 NFE2L3Q9Y4A8 694 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 EXTL3O43909 919 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 NPTXRO95502 500 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 CSF2RAP15509 400 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 RAB27AP51159 221 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 PPIGQ13427 754 aaKnown RBP eCLIP19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 FILIP1Q7Z7B0 1213 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 DEFB128Q7Z7B8 93 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 GPD1LQ8N335 351 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 MKNK1Q9BUB5 465 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 SRRTQ9BXP5 876 aaKnown RBP19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 TSPYL2Q9H2G4 693 aaPredicted RBP19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 THAP9Q9H5L6 903 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 RGS18Q9NS28 235 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 C1orf112Q9NSG2 853 aa19.51■□□□□ 0.71
SDCBP2-201ENST00000339987 TET1Q8NFU7 2136 aa19.5■□□□□ 0.71
SDCBP2-201ENST00000339987 BECN2A8MW95 431 aa19.5■□□□□ 0.71
SDCBP2-201ENST00000339987 MAPK13O15264 365 aa19.5■□□□□ 0.71
SDCBP2-201ENST00000339987 SLC16A3O15427 465 aaKnown RBP19.5■□□□□ 0.71
SDCBP2-201ENST00000339987 EXOC3O60645 756 aa19.5■□□□□ 0.71
SDCBP2-201ENST00000339987 SKIP12755 728 aa19.5■□□□□ 0.71
SDCBP2-201ENST00000339987 GRM5P41594 1212 aa19.5■□□□□ 0.71
SDCBP2-201ENST00000339987 POU5F1Q01860 360 aaKnown RBP19.5■□□□□ 0.71
SDCBP2-201ENST00000339987 GAS2L3Q86XJ1 694 aa19.5■□□□□ 0.71
SDCBP2-201ENST00000339987 LINC01599Q8WXQ3 324 aa19.5■□□□□ 0.71
SDCBP2-201ENST00000339987 SAAL1Q96ER3 474 aa19.5■□□□□ 0.71
SDCBP2-201ENST00000339987 TRIM6Q9C030 488 aaPredicted RBP19.5■□□□□ 0.71
SDCBP2-201ENST00000339987 IL23AQ9NPF7 189 aa19.5■□□□□ 0.71
SDCBP2-201ENST00000339987 FAM105AQ9NUU6 356 aa19.5■□□□□ 0.71
SDCBP2-201ENST00000339987 NR2E3Q9Y5X4 410 aa19.5■□□□□ 0.71
SDCBP2-201ENST00000339987 ZNF623O75123 536 aa19.49■□□□□ 0.71
SDCBP2-201ENST00000339987 HARSP12081 509 aaKnown RBP19.49■□□□□ 0.71
SDCBP2-201ENST00000339987 FPGSQ05932 587 aa19.49■□□□□ 0.71
SDCBP2-201ENST00000339987 TCTN1Q2MV58 587 aa19.49■□□□□ 0.71
SDCBP2-201ENST00000339987 CRELD2Q6UXH1 353 aaPredicted RBP19.49■□□□□ 0.71
SDCBP2-201ENST00000339987 RTN4RL1Q86UN2 441 aaPredicted RBP19.49■□□□□ 0.71
SDCBP2-201ENST00000339987 LUZP1Q86V48 1076 aa19.49■□□□□ 0.71
SDCBP2-201ENST00000339987 BADQ92934 168 aa19.49■□□□□ 0.71
SDCBP2-201ENST00000339987 FRMD4BQ9Y2L6 1034 aa19.49■□□□□ 0.71
SDCBP2-201ENST00000339987 PCDHB2Q9Y5E7 798 aa19.49■□□□□ 0.71
SDCBP2-201ENST00000339987 A0A0U1RQF3 1178 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 C9IYK1 514 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 RBAK-RBAKDNI3L0D1 243 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 AKAP3O75969 853 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 GNA14O95837 355 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 CLTAP09496 248 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 PSMC2P35998 433 aaKnown RBP19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 CASP4P49662 377 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 FAM189BP81408 668 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 CDKAL1Q5VV42 579 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 CEP135Q66GS9 1140 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 SLC24A5Q71RS6 500 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 MRPL10Q7Z7H8 261 aaKnown RBP19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 FAM114A1Q8IWE2 563 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 THNSL1Q8IYQ7 743 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 CEP120Q8N960 986 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 SMG8Q8ND04 991 aaKnown RBP19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 ZSWIM2Q8NEG5 633 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 FAM213AQ9BRX8 229 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 CCDC94Q9BW85 323 aaPredicted RBP19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 HSD3B7Q9H2F3 369 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 FANCLQ9NW38 375 aa19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 CPSF3Q9UKF6 684 aaKnown RBP19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 ZMYND8Q9ULU4 1186 aaPredicted RBP19.48■□□□□ 0.71
SDCBP2-201ENST00000339987 IPPQ9Y573 584 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms