RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 SMIM24O75264 130 aa15.12■□□□□ 0.01
PCDH8-201ENST00000338862 POTEJP0CG39 1038 aa15.12■□□□□ 0.01
PCDH8-201ENST00000338862 GBP1P32455 592 aa15.12■□□□□ 0.01
PCDH8-201ENST00000338862 AUHQ13825 339 aaKnown RBP15.12■□□□□ 0.01
PCDH8-201ENST00000338862 FBXO28Q9NVF7 368 aa15.12■□□□□ 0.01
PCDH8-201ENST00000338862 DONSONQ9NYP3 566 aa15.12■□□□□ 0.01
PCDH8-201ENST00000338862 AGTPBP1Q9UPW5 1226 aa15.12■□□□□ 0.01
PCDH8-201ENST00000338862 LGR5O75473 907 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 BAG2O95816 211 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 ARP10275 920 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 KRT10P13645 584 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 GAP43P17677 238 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 SHMT1P34896 483 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 NSFP46459 744 aaKnown RBP15.11■□□□□ 0.01
PCDH8-201ENST00000338862 IRX4P78413 519 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 RCN2Q14257 317 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 PLA2G4FQ68DD2 849 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 ARHGEF18Q6ZSZ5 1173 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 GLT8D2Q9H1C3 349 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 C10orf88Q9H8K7 445 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 SLCO1B3Q9NPD5 702 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 MCM8Q9UJA3 840 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 DISP2A7MBM2 1401 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 HNRNPDLO14979 420 aaKnown RBP15.11■□□□□ 0.01
PCDH8-201ENST00000338862 PLS3P13797 630 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 DUPD1Q68J44 220 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 CBWD2Q8IUF1 395 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 CTAGE3PQ8IX95 158 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 OSBPL1AQ9BXW6 950 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 KDM4CQ9H3R0 1056 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 TRAF3IP3Q9Y228 551 aa15.11■□□□□ 0.01
PCDH8-201ENST00000338862 CFAP69A5D8W1 941 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 SGK1O00141 431 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 ATP2A2P16615 1042 aaKnown RBP15.1■□□□□ 0.01
PCDH8-201ENST00000338862 HOXD13P35453 343 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 COPS2P61201 443 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 IZUMO3Q5VZ72 239 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 FAM228AQ86W67 206 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 ZBTB10Q96DT7 871 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 NT5C1BQ96P26 610 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 NUDCD1Q96RS6 583 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 CDCA7Q9BWT1 371 aaPredicted RBP15.1■□□□□ 0.01
PCDH8-201ENST00000338862 TEKT3Q9BXF9 490 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.1■□□□□ 0.01
PCDH8-201ENST00000338862 CRKP46108 304 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 CPA2P48052 419 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 POLE2P56282 527 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 PPATQ06203 517 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 PPP3CAQ08209 521 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 LRRC37BQ96QE4 947 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 CYTH2Q99418 400 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 NPHS2Q9NP85 383 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.1■□□□□ 0.01
PCDH8-201ENST00000338862 PITPNM2Q9BZ72 1349 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 MIF4GDA9UHW6 222 aaKnown RBP15.1■□□□□ 0.01
PCDH8-201ENST00000338862 MEIS2O14770 477 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 PPFIA2O75334 1257 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 CBX6O95503 412 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 MFAP3P55082 362 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 NOP14P78316 857 aaKnown RBP15.1■□□□□ 0.01
PCDH8-201ENST00000338862 CNGA2Q16280 664 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 C6orf89Q6UWU4 347 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 ZNF668Q96K58 619 aaPredicted RBP15.1■□□□□ 0.01
PCDH8-201ENST00000338862 SMC6Q96SB8 1091 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 ANKFY1Q9P2R3 1169 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 ARL2BPQ9Y2Y0 163 aa15.1■□□□□ 0.01
PCDH8-201ENST00000338862 PFASO15067 1338 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 IPO5O00410 1097 aaKnown RBP15.09■□□□□ 0.01
PCDH8-201ENST00000338862 EDIL3O43854 480 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 RALAP11233 206 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 PSMC4P43686 418 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 PLCB4Q15147 1175 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 ZBED8Q8IZ13 594 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 XXYLT1Q8NBI6 393 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.09■□□□□ 0.01
PCDH8-201ENST00000338862 IQCGQ9H095 443 aaKnown RBP15.09■□□□□ 0.01
PCDH8-201ENST00000338862 C12orf65Q9H3J6 166 aaKnown RBP15.09■□□□□ 0.01
PCDH8-201ENST00000338862 SYNCQ9H7C4 482 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 PPEF1O14829 653 aaPredicted RBP15.09■□□□□ 0.01
PCDH8-201ENST00000338862 DDX3YO15523 660 aaKnown RBP15.09■□□□□ 0.01
PCDH8-201ENST00000338862 SNX3O60493 162 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 FOSP01100 380 aaPredicted RBP15.09■□□□□ 0.01
PCDH8-201ENST00000338862 ZSCAN5DPP0CG00 497 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 WDR44Q5JSH3 913 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 RBM15Q96T37 977 aaKnown RBP eCLIP15.09■□□□□ 0.01
PCDH8-201ENST00000338862 SIX2Q9NPC8 291 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 DDR1Q08345 913 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 ORC2Q13416 577 aaPredicted RBP15.09■□□□□ 0.01
PCDH8-201ENST00000338862 RASA3Q14644 834 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 P3H1Q32P28 736 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 APBB1IPQ7Z5R6 666 aaPredicted RBP15.09■□□□□ 0.01
PCDH8-201ENST00000338862 NOP9Q86U38 636 aaKnown RBP15.09■□□□□ 0.01
PCDH8-201ENST00000338862 STMN2Q93045 179 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 RMDN2Q96LZ7 410 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 FAM20AQ96MK3 541 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 FAM213AQ9BRX8 229 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 DNAJC18Q9H819 358 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 TMEM59LQ9UK28 342 aa15.09■□□□□ 0.01
PCDH8-201ENST00000338862 SLITRK3O94933 977 aa15.08■□□□□ 0.01
PCDH8-201ENST00000338862 STAT2P52630 851 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms