RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 CHD2O14647 1828 aaKnown RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 ADAMTS3O15072 1205 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 H2AFXP16104 143 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 MMGT1Q8N4V1 131 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 ZNF526Q8TF50 670 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 FAM149B1Q96BN6 582 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 RFC5P40937 340 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 ITIH3Q06033 890 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 TAF12Q16514 161 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 CCDC137Q6PK04 289 aaKnown RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 IRF2BP1Q8IU81 584 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 TOPORSQ9NS56 1045 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 PCDHB2Q9Y5E7 798 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 SYNJ2BP-COX16A0A087WUM0 186 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 TTC31Q49AM3 519 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 GIMAP7Q8NHV1 300 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 PPM1EQ8WY54 764 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 WNT8AQ9H1J5 351 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 GOLPH3Q9H4A6 298 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 NGRNQ9NPE2 291 aaKnown RBP6.73□□□□□ -1.33
PRKDC-202ENST00000338368 COX16Q9P0S2 106 aa6.73□□□□□ -1.33
PRKDC-202ENST00000338368 SEZ6Q53EL9 994 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 CACNA2D3Q8IZS8 1091 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 RBBP8NLQ8NC74 664 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 PROCA1Q8NCQ7 364 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 DNAJC17Q9NVM6 304 aaKnown RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 OATP04181 439 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 CASP5P51878 434 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 OR6B3Q8NGW1 331 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 MED15Q96RN5 788 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 CALB1P05937 261 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 MYBPC2Q14324 1141 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 CCDC6Q16204 474 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 RIN2Q8WYP3 895 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 WDR18Q9BV38 432 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 AIPL1Q9NZN9 384 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 VWA5AO00534 786 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 BASP1P80723 227 aaKnown RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 MXRA7P84157 204 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 PDCLQ13371 301 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 MXD4Q14582 209 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 C1orf186Q6ZWK4 172 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 C1orf54Q8WWF1 131 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 ZWILCHQ9H900 591 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 AGAP1Q9UPQ3 857 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 RASGRF2O14827 1237 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 HLA-DRAP01903 254 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 CARSP49589 748 aaKnown RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 MIIPQ5JXC2 388 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 CASC4Q6P4E1 433 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 TRIM72Q6ZMU5 477 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 SH3BP5LQ7L8J4 393 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 CPA5Q8WXQ8 436 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 SNX25Q9H3E2 840 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 SMARCAD1Q9H4L7 1026 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 PXMP2Q9NR77 195 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 IGSF9BQ9UPX0 1349 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 PBX1P40424 430 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 YWHAGP61981 247 aaKnown RBP eCLIP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 PPP2R5DQ14738 602 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 ECM1Q16610 540 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 COBLL1Q53SF7 1204 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 WDR59Q6PJI9 974 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 NUP85Q9BW27 656 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 DNAJC18Q9H819 358 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 SSTR3P32745 418 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 PMS2P54278 862 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 BSPRYQ5W0U4 402 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 AGO4Q9HCK5 861 aaKnown RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 MYH13Q9UKX3 1938 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 FAM187AA6NFU0 413 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 ZSCAN20P17040 1043 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 CA8P35219 290 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 KCNMA1Q12791 1236 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 WDR93Q6P2C0 686 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 DARS2Q6PI48 645 aaKnown RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 NIPA1Q7RTP0 329 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 ZNF571Q7Z3V5 609 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.72□□□□□ -1.334e-7■■■□□ 15.8
PRKDC-202ENST00000338368 CFAP57Q96MR6 1250 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 FBXL5Q9UKA1 691 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 PLAAQ9Y263 795 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 SIK3Q9Y2K2 1263 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 COMMD10Q9Y6G5 202 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 TJP3O95049 919 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 SPATA31C1P0DKV0 1188 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 TCF7P36402 384 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 PPP2R5CQ13362 524 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 TFDP2Q14188 446 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 SHROOM1Q2M3G4 852 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 ARHGEF18Q6ZSZ5 1173 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 STRIP2Q9ULQ0 834 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 MYBL1P10243 752 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 SARNPP82979 210 aaKnown RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 THAP2Q9H0W7 228 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 PARVAQ9NVD7 372 aa6.72□□□□□ -1.33
PRKDC-202ENST00000338368 DMGDHQ9UI17 866 aaKnown RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 DBR1Q9UK59 544 aaKnown RBP6.72□□□□□ -1.33
PRKDC-202ENST00000338368 A0A0U1RQJ8 604 aa6.71□□□□□ -1.33
PRKDC-202ENST00000338368 IQCA1LA6NCM1 817 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms