RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 NFKBIZQ9BYH8 718 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 POLR3FQ9H1D9 316 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-202ENST00000337571 SFXN1Q9H9B4 322 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 XPNPEP1Q9NQW7 623 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 SORCS3Q9UPU3 1222 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 GIT1Q9Y2X7 761 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 PRG3Q9Y2Y8 225 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-202ENST00000337571 TDRD15B5MCY1 1934 aaKnown RBP11.82□□□□□ -0.52
CAPN3-202ENST00000337571 POTEMA6NI47 508 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 USO1O60763 962 aaKnown RBP11.81□□□□□ -0.52
CAPN3-202ENST00000337571 SOD2P04179 222 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 ADH1AP07327 375 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 CNPP09543 421 aaKnown RBP11.81□□□□□ -0.52
CAPN3-202ENST00000337571 ARF4P18085 180 aaPredicted RBP11.81□□□□□ -0.52
CAPN3-202ENST00000337571 GLRA2P23416 452 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 MLH1P40692 756 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 RBM25P49756 843 aaKnown RBP11.81□□□□□ -0.52
CAPN3-202ENST00000337571 NHLH1Q02575 133 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 SLC27A1Q6PCB7 646 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 CATSPER3Q86XQ3 398 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 CCDC83Q8IWF9 413 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 COLGALT2Q8IYK4 626 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 ASAP3Q8TDY4 903 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 ZSCAN31Q96LW9 406 aaPredicted RBP11.81□□□□□ -0.52
CAPN3-202ENST00000337571 FOXP1Q9H334 677 aaPredicted RBP11.81□□□□□ -0.52
CAPN3-202ENST00000337571 SCUBE2Q9NQ36 999 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 PRMT7Q9NVM4 692 aaPredicted RBP11.81□□□□□ -0.52
CAPN3-202ENST00000337571 PARP2Q9UGN5 583 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 LIMD1Q9UGP4 676 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 NOL7Q9UMY1 257 aaKnown RBP11.81□□□□□ -0.52
CAPN3-202ENST00000337571 USTQ9Y2C2 406 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 HES2Q9Y543 173 aa11.81□□□□□ -0.52
CAPN3-202ENST00000337571 A0A1B0GUA9 196 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 ARHGEF35A5YM69 484 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 C2CD4DB7Z1M9 353 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 NPTXRO95502 500 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 OR52Z1P0C646 297 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 AKAP5P24588 427 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 GLUD2P49448 558 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 SCNN1GP51170 649 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 CLCN4P51793 760 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 PTPN5P54829 565 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 HMGN5P82970 282 aaKnown RBP11.8□□□□□ -0.52
CAPN3-202ENST00000337571 ORC2Q13416 577 aaPredicted RBP11.8□□□□□ -0.52
CAPN3-202ENST00000337571 ZNF174Q15697 407 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 KANK3Q6NY19 840 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 OTOP3Q7RTS5 596 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 ZDHHC14Q8IZN3 488 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 PRIMPOLQ96LW4 560 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 ZFP42Q96MM3 310 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 RPS6KC1Q96S38 1066 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 POLR3CQ9BUI4 534 aaPredicted RBP11.8□□□□□ -0.52
CAPN3-202ENST00000337571 VN1R3Q9BXE9 311 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 IRF2BPLQ9H1B7 796 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 C2orf40Q9H1Z8 148 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 TMEM60Q9H2L4 133 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 CDH22Q9UJ99 828 aa11.8□□□□□ -0.52
CAPN3-202ENST00000337571 WNT7AO00755 349 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 B4GALT5O43286 388 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 B4GALT3O60512 393 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 LILRB3O75022 631 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 TADA2AO75478 443 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 SPATA31C1P0DKV0 1188 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 RPA1P27694 616 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 MRE11P49959 708 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 PRPF4BQ13523 1007 aaKnown RBP11.79□□□□□ -0.52
CAPN3-202ENST00000337571 PPP2R5AQ15172 486 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 MAPK6Q16659 721 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 USP41Q3LFD5 358 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 HAUS3Q68CZ6 603 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 PADI6Q6TGC4 694 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 C15orf39Q6ZRI6 1047 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 CCDC149Q6ZUS6 474 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 GPR149Q86SP6 731 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 DEPTORQ8TB45 409 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 ASIC4Q96FT7 647 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 IFT74Q96LB3 600 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 ADPGKQ9BRR6 497 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 HERC2P3Q9BVR0 1158 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 RAB34Q9BZG1 259 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 MFSD1Q9H3U5 465 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 NXF3Q9H4D5 531 aaKnown RBP11.79□□□□□ -0.52
CAPN3-202ENST00000337571 GPRC5CQ9NQ84 441 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 SH2B1Q9NRF2 756 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-202ENST00000337571 MIOSQ9NXC5 875 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 KLK14Q9P0G3 267 aa11.79□□□□□ -0.52
CAPN3-202ENST00000337571 CCDC195A0A1B0GUA6 201 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 N4BP3O15049 544 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 INPPL1O15357 1258 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 TEX28O15482 410 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 MED24O75448 989 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 GLUD1P00367 558 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 LIG1P18858 919 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 MUTP22033 750 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 AVPR2P30518 371 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 TRAPPC10P48553 1259 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 CREMQ03060 361 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 DSC1Q08554 894 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 GRIK3Q13003 919 aa11.78□□□□□ -0.52
CAPN3-202ENST00000337571 AMHR2Q16671 573 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms