RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 FAM167BQ9BTA0 163 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 SLC13A1Q9BZW2 595 aa14.61□□□□□ -0.07
RTN4-202ENST00000337526 AP5Z1O43299 807 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 EEF1B2P24534 225 aaKnown RBP14.6□□□□□ -0.07
RTN4-202ENST00000337526 FSCBQ5H9T9 825 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 TMTC4Q5T4D3 741 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 FBXW10Q5XX13 1052 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 FAM96AQ9H5X1 160 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 SENP1Q9P0U3 644 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 GGT7Q9UJ14 662 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 HPSEQ9Y251 543 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 FLT1P17948 1338 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 CEMIPQ8WUJ3 1361 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 PHF20L1A8MW92 1017 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 KRT10P13645 584 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 RASA1P20936 1047 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 DRP2Q13474 957 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 LRIG3Q6UXM1 1119 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 CYFIP1Q7L576 1253 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 SPATA21Q7Z572 469 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 DDX42Q86XP3 938 aaKnown RBP eCLIP14.6□□□□□ -0.079e-7■■□□□ 12.1
RTN4-202ENST00000337526 NUDCD3Q8IVD9 361 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 MMGT1Q8N4V1 131 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 SLC30A5Q8TAD4 765 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 MRPL46Q9H2W6 279 aaKnown RBP14.6□□□□□ -0.07
RTN4-202ENST00000337526 UVRAGQ9P2Y5 699 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 FBXO40Q9UH90 709 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 DAGLAQ9Y4D2 1042 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 PMLP29590 882 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 BTBD6Q96KE9 485 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 FAM161BQ96MY7 647 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 TTC1Q99614 292 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 PARVAQ9NVD7 372 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 INPP5FQ9Y2H2 1132 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 MYO3AQ8NEV4 1616 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 E9PCH4 1651 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 APOEP02649 317 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 GPC3P51654 580 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 SEC24CP53992 1094 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 PHEXP78562 749 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 TSTA3Q13630 321 aaPredicted RBP14.6□□□□□ -0.07
RTN4-202ENST00000337526 LMBRD2Q68DH5 695 aaPredicted RBP14.6□□□□□ -0.07
RTN4-202ENST00000337526 C9orf72Q96LT7 481 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 FGD4Q96M96 766 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 PRMT1Q99873 361 aaKnown RBP14.6□□□□□ -0.07
RTN4-202ENST00000337526 FUT8Q9BYC5 575 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 POLR3FQ9H1D9 316 aaPredicted RBP14.6□□□□□ -0.07
RTN4-202ENST00000337526 ZNF302Q9NR11 478 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.6□□□□□ -0.07
RTN4-202ENST00000337526 ARL2BPQ9Y2Y0 163 aa14.6□□□□□ -0.07
RTN4-202ENST00000337526 TNS3Q68CZ2 1445 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 MYO3BQ8WXR4 1341 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 CHN1P15882 459 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 NFX1Q12986 1120 aaKnown RBP14.59□□□□□ -0.07
RTN4-202ENST00000337526 RWDD4Q6NW29 188 aaKnown RBP14.59□□□□□ -0.07
RTN4-202ENST00000337526 DHX38Q92620 1227 aaKnown RBP14.59□□□□□ -0.07
RTN4-202ENST00000337526 CACYBPQ9HB71 228 aaKnown RBP14.59□□□□□ -0.07
RTN4-202ENST00000337526 TOPORSQ9NS56 1045 aaPredicted RBP14.59□□□□□ -0.07
RTN4-202ENST00000337526 HERC5Q9UII4 1024 aaKnown RBP14.59□□□□□ -0.07
RTN4-202ENST00000337526 SUGT1Q9Y2Z0 365 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 KPNA7A9QM74 516 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 TBX3O15119 743 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 PDHBP11177 359 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 H2AFXP16104 143 aaPredicted RBP14.59□□□□□ -0.07
RTN4-202ENST00000337526 SLC1A1P43005 524 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 PLA2G4AP47712 749 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 CENPKQ9BS16 269 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 DDX56Q9NY93 547 aaKnown RBP14.59□□□□□ -0.07
RTN4-202ENST00000337526 M0QYV0 167 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 HIF1AQ16665 826 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 DUOXA2Q1HG44 320 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 DSTYKQ6XUX3 929 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 USP38Q8NB14 1042 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 CXorf38Q8TB03 319 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 PNKPQ96T60 521 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 GOLPH3Q9H4A6 298 aa14.59□□□□□ -0.07
RTN4-202ENST00000337526 SUDS3Q9H7L9 328 aaPredicted RBP14.59□□□□□ -0.07
RTN4-202ENST00000337526 PHF2O75151 1096 aa14.58□□□□□ -0.07
RTN4-202ENST00000337526 HSPA8P11142 646 aaKnown RBP14.58□□□□□ -0.07
RTN4-202ENST00000337526 RAD23BP54727 409 aa14.58□□□□□ -0.07
RTN4-202ENST00000337526 ERVK-24P63145 666 aa14.58□□□□□ -0.07
RTN4-202ENST00000337526 KIF22Q14807 665 aa14.58□□□□□ -0.07
RTN4-202ENST00000337526 FAM102AQ5T9C2 384 aaPredicted RBP14.58□□□□□ -0.07
RTN4-202ENST00000337526 HEATR6Q6AI08 1181 aaKnown RBP14.58□□□□□ -0.07
RTN4-202ENST00000337526 ZNF668Q96K58 619 aaPredicted RBP14.58□□□□□ -0.07
RTN4-202ENST00000337526 TRABDQ9H4I3 376 aa14.58□□□□□ -0.07
RTN4-202ENST00000337526 HSPBP1Q9NZL4 362 aa14.58□□□□□ -0.07
RTN4-202ENST00000337526 SALL3Q9BXA9 1300 aa14.58□□□□□ -0.07
RTN4-202ENST00000337526 DIAPH2O60879 1101 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 NDUFB10O96000 172 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 YWHABP31946 246 aaKnown RBP14.58□□□□□ -0.08
RTN4-202ENST00000337526 CDH6P55285 790 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 COPS2P61201 443 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 TNFAIP2Q03169 654 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 TRMT10CQ7L0Y3 403 aaKnown RBP14.58□□□□□ -0.08
RTN4-202ENST00000337526 RBM15Q96T37 977 aaKnown RBP eCLIP14.58□□□□□ -0.084e-8■■■■■ 30.1
RTN4-202ENST00000337526 ADAM33Q9BZ11 813 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 YIPF3Q9GZM5 350 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 NBPF3Q9H094 633 aa14.58□□□□□ -0.08
RTN4-202ENST00000337526 XAB2Q9HCS7 855 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms