RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 CBWD1Q9BRT8 395 aa6.93□□□□□ -1.3
HMG20A-201ENST00000336216 INTS2Q9H0H0 1204 aaKnown RBP6.93□□□□□ -1.3
HMG20A-201ENST00000336216 NGRNQ9NPE2 291 aaKnown RBP6.93□□□□□ -1.3
HMG20A-201ENST00000336216 TBC1D22BQ9NU19 505 aa6.93□□□□□ -1.3
HMG20A-201ENST00000336216 RAB20Q9NX57 234 aa6.93□□□□□ -1.3
HMG20A-201ENST00000336216 ADAM22Q9P0K1 906 aa6.93□□□□□ -1.3
HMG20A-201ENST00000336216 CPSF2Q9P2I0 782 aaKnown RBP6.93□□□□□ -1.3
HMG20A-201ENST00000336216 DBR1Q9UK59 544 aaKnown RBP6.93□□□□□ -1.3
HMG20A-201ENST00000336216 MAD1L1Q9Y6D9 718 aa6.93□□□□□ -1.3
HMG20A-201ENST00000336216 WDR91A4D1P6 747 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 ENTPD3O75355 529 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 AKAP3O75969 853 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 UPP2O95045 317 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 PGK2P07205 417 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 FGFR4P22455 802 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 SLC8A3P57103 927 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 PSMC5P62195 406 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 ERVK-9P63128 1117 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 EPHA7Q15375 998 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 PPP6R3Q5H9R7 873 aaPredicted RBP6.92□□□□□ -1.3
HMG20A-201ENST00000336216 ZNF449Q6P9G9 518 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 ZNF507Q8TCN5 953 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 HEXIM2Q96MH2 286 aaKnown RBP6.92□□□□□ -1.3
HMG20A-201ENST00000336216 PNMA5Q96PV4 448 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 POLR3FQ9H1D9 316 aaPredicted RBP6.92□□□□□ -1.3
HMG20A-201ENST00000336216 NOD2Q9HC29 1040 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 DONSONQ9NYP3 566 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 GRIN2DO15399 1336 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 H7C0C1 242 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 WNT10BO00744 389 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 CAPN9O14815 690 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 STAM2O75886 525 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 GGPS1O95749 300 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 CAP2P40123 477 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 ATP5OP48047 213 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 ZNF131P52739 623 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 TAF11Q15544 211 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 DACT2Q5SW24 774 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 FAM160B1Q5W0V3 765 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 PPP4R3CPQ6ZMV5 832 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 ZNF280CQ8ND82 737 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.92□□□□□ -1.3
HMG20A-201ENST00000336216 SCFD1Q8WVM8 642 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 ARHGEF2Q92974 986 aaKnown RBP6.92□□□□□ -1.3
HMG20A-201ENST00000336216 FERMT1Q9BQL6 677 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 DNAI2Q9GZS0 605 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 ACP6Q9NPH0 428 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 RNF14Q9UBS8 474 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 FAM198AQ9UFP1 575 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 MYO3BQ8WXR4 1341 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 IREB2P48200 963 aaKnown RBP6.92□□□□□ -1.3
HMG20A-201ENST00000336216 FXR2P51116 673 aaKnown RBP eCLIP6.92□□□□□ -1.3
HMG20A-201ENST00000336216 CASP5P51878 434 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 DR1Q01658 176 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 FUT2Q10981 343 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 KRT81Q14533 505 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 ZRSR2Q15696 482 aaKnown RBP6.92□□□□□ -1.3
HMG20A-201ENST00000336216 SWT1Q5T5J6 900 aaKnown RBP6.92□□□□□ -1.3
HMG20A-201ENST00000336216 FUKQ8N0W3 1084 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 NME8Q8N427 588 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 USP38Q8NB14 1042 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 NEK9Q8TD19 979 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 CDHR1Q96JP9 859 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 BTBD6Q96KE9 485 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 ERGIC2Q96RQ1 377 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 SH3GL2Q99962 352 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 MED10Q9BTT4 135 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 TARS2Q9BW92 718 aaKnown RBP6.92□□□□□ -1.3
HMG20A-201ENST00000336216 UNC45AQ9H3U1 944 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 JPH1Q9HDC5 661 aaPredicted RBP6.92□□□□□ -1.3
HMG20A-201ENST00000336216 ZNF302Q9NR11 478 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 BLOC1S4Q9NUP1 217 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 RNF19AQ9NV58 838 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 HSPBP1Q9NZL4 362 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 HESX1Q9UBX0 185 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 NUB1Q9Y5A7 615 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 MYH14Q7Z406 1995 aaKnown RBP6.92□□□□□ -1.3
HMG20A-201ENST00000336216 DCDC2CA8MYV0 355 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 PDXKO00764 312 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 CAND2O75155 1236 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 FMO5P49326 533 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 BASP1P80723 227 aaKnown RBP6.92□□□□□ -1.3
HMG20A-201ENST00000336216 ORC1Q13415 861 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 CUL1Q13616 776 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 SETDB1Q15047 1291 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 MAPK6Q16659 721 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 OR6B2Q6IFH4 312 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 CBWD2Q8IUF1 395 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 PALM2Q8IXS6 379 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 RNF10Q8N5U6 811 aaKnown RBP6.92□□□□□ -1.3
HMG20A-201ENST00000336216 ACAD9Q9H845 621 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 SPATS2LQ9NUQ6 558 aaKnown RBP6.92□□□□□ -1.3
HMG20A-201ENST00000336216 SLC9A2Q9UBY0 812 aa6.92□□□□□ -1.3
HMG20A-201ENST00000336216 RASGRF2O14827 1237 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 DDNO94850 711 aaPredicted RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 ATF2P15336 505 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 MAN1A1P33908 653 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 NUMBP49757 651 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 KRT76Q01546 638 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 TAF12Q16514 161 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms