RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 GJC1P36383 396 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 MXI1P50539 228 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 TBC1D25Q3MII6 688 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 SLC30A5Q8TAD4 765 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 CRYGNQ8WXF5 182 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 CHMP6Q96FZ7 201 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 ELAC2Q9BQ52 826 aaKnown RBP17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 MLXIPLQ9NP71 852 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 SAMD15Q9P1V8 674 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 SEL1LQ9UBV2 794 aa17.73■□□□□ 0.43
CDC42EP4-201ENST00000335793 ANKRD33BA6NCL7 494 aa17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 DNM1LO00429 736 aa17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 ACSL3O95573 720 aa17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 PEX3P56589 373 aa17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 IFI35P80217 286 aaPredicted RBP17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 AOC3Q16853 763 aa17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 PABPC3Q9H361 631 aaKnown RBP17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 MRPL11Q9Y3B7 192 aaKnown RBP17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 IGLV3-22A0A075B6J6 115 aa17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 TMEM150BA6NC51 233 aa17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 PSMD10O75832 226 aa17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 SGPL1O95470 568 aa17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 LRRC14Q15048 493 aa17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 INTS8Q75QN2 995 aaKnown RBP17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 CHURC1Q8WUH1 139 aa17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 XPO6Q96QU8 1125 aaKnown RBP17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 GGT7Q9UJ14 662 aa17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 DIS3Q9Y2L1 958 aaKnown RBP17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 CTDP1Q9Y5B0 961 aaPredicted RBP17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 SYNGAP1Q96PV0 1343 aa17.72■□□□□ 0.43
CDC42EP4-201ENST00000335793 ZMYM2Q9UBW7 1377 aa17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 A0A1B0GVG6 124 aa17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 SLC16A4O15374 487 aa17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 DLATP10515 647 aaKnown RBP17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 PPP3CAQ08209 521 aa17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 ANKRD42Q8N9B4 389 aa17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 CCDC197Q8NCU1 140 aa17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 CNOT10Q9H9A5 744 aaKnown RBP17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 MYCLP12524 364 aaPredicted RBP17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 RAB27AP51159 221 aa17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 SP4Q02446 784 aa17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 PPATQ06203 517 aa17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 BYSLQ13895 437 aaKnown RBP17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 FAM102BQ5T8I3 360 aa17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 BZW1Q7L1Q6 419 aaKnown RBP17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 GMCL1P1Q8NEA9 526 aa17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 EPS8L3Q8TE67 593 aaKnown RBP17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 C1orf54Q8WWF1 131 aa17.71■□□□□ 0.43
CDC42EP4-201ENST00000335793 FAM187AA6NFU0 413 aa17.71■□□□□ 0.42
CDC42EP4-201ENST00000335793 RASGRF2O14827 1237 aa17.71■□□□□ 0.42
CDC42EP4-201ENST00000335793 DHX34Q14147 1143 aaKnown RBP17.71■□□□□ 0.42
CDC42EP4-201ENST00000335793 CC2D2BQ6DHV5 1058 aa17.71■□□□□ 0.42
CDC42EP4-201ENST00000335793 NLGN1Q8N2Q7 840 aa17.71■□□□□ 0.42
CDC42EP4-201ENST00000335793 XXYLT1Q8NBI6 393 aa17.71■□□□□ 0.42
CDC42EP4-201ENST00000335793 PRMT1Q99873 361 aaKnown RBP17.71■□□□□ 0.42
CDC42EP4-201ENST00000335793 NUP85Q9BW27 656 aa17.71■□□□□ 0.42
CDC42EP4-201ENST00000335793 GSTTP1A0A1W2PQM5 241 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 CHRNA3P32297 505 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 RPL21P46778 160 aaKnown RBP17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 FAM133BQ5BKY9 247 aaKnown RBP17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 STRIP1Q5VSL9 837 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 DUPD1Q68J44 220 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 TRIM68Q6AZZ1 485 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 TATDN1Q6P1N9 297 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 CPNE8Q86YQ8 564 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 CCDC50Q8IVM0 306 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 C1orf131Q8NDD1 294 aaKnown RBP17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 ZSWIM2Q8NEG5 633 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 ATP6V0A4Q9HBG4 840 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 GPRC5CQ9NQ84 441 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 MIF4GDA9UHW6 222 aaKnown RBP17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 PHF2O75151 1096 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 PYGMP11217 842 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 LAMB3Q13751 1172 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 RRP1BQ14684 758 aaKnown RBP17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 TLDC1Q6P9B6 456 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 ZNF564Q8TBZ8 553 aaPredicted RBP17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 HVCN1Q96D96 273 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 MASTLQ96GX5 879 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 ACCSQ96QU6 501 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 OSBPL7Q9BZF2 842 aa17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 SCAF8Q9UPN6 1271 aaKnown RBP17.7■□□□□ 0.42
CDC42EP4-201ENST00000335793 EPC2Q52LR7 807 aa17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 POP1Q99575 1024 aaKnown RBP17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 CCPG1Q9ULG6 757 aa17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 TCRBV7S2A1N4TA0A589 114 aa17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 KIAA0391O15091 583 aaKnown RBP17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 CYP3A4P08684 503 aa17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 CHADLQ6NUI6 762 aa17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 SLC47A2Q86VL8 602 aa17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 LDHDQ86WU2 507 aa17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 PRELID2Q8N945 189 aa17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 ATP8B4Q8TF62 1192 aa17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 RNF25Q96BH1 459 aaPredicted RBP17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 IDI2Q9BXS1 227 aa17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 TMEM206Q9H813 350 aa17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 HSPBP1Q9NZL4 362 aa17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 PODXLO00592 558 aa17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 PPFIA2O75334 1257 aa17.69■□□□□ 0.42
CDC42EP4-201ENST00000335793 ALAS1P13196 640 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms