RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 SETSIPP0DME0 302 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 ZNF18P17022 549 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 CNTN2Q02246 1040 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 E2F4Q16254 413 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 HYIQ5T013 277 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 SPRYD7Q5W111 196 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 OR6B2Q6IFH4 312 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 EFCAB12Q6NXP0 572 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 SH3BP5LQ7L8J4 393 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 PLPPR4Q7Z2D5 763 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 ZBTB33Q86T24 672 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 INTS2Q9H0H0 1204 aaKnown RBP7.35□□□□□ -1.23
SF3B1-201ENST00000335508 LRRD1A4D1F6 860 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 PPP1R3GB7ZBB8 358 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 PRR29P0C7W0 189 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 ADORA2AP29274 412 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 AXLP30530 894 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 ALDH3A1P30838 453 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 SOX5P35711 763 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 NOP14P78316 857 aaKnown RBP7.35□□□□□ -1.23
SF3B1-201ENST00000335508 GCNT1Q02742 428 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 SESTD1Q86VW0 696 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 PPP1R14CQ8TAE6 165 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 CYP2W1Q8TAV3 490 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 SPATA20Q8TB22 786 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 ZNF507Q8TCN5 953 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 SAAL1Q96ER3 474 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 ZNF112Q9UJU3 913 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 SDK1Q7Z5N4 2213 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 GOLGA8SH3BPF8 625 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 RIOK3O14730 519 aaKnown RBP7.35□□□□□ -1.23
SF3B1-201ENST00000335508 CD58P19256 250 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 COBLL1Q53SF7 1204 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 SGO2Q562F6 1265 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 EMBQ6PCB8 327 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 MAP4K3Q8IVH8 894 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 NLGN2Q8NFZ4 835 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 SCFD1Q8WVM8 642 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 HAS1Q92839 578 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 NSRP1Q9H0G5 558 aaKnown RBP7.35□□□□□ -1.23
SF3B1-201ENST00000335508 CPA4Q9UI42 421 aa7.35□□□□□ -1.23
SF3B1-201ENST00000335508 MAPK13O15264 365 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 PRPSAP2O60256 369 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 FMR1Q06787 632 aaKnown RBP eCLIP7.34□□□□□ -1.236e-7■■□□□ 13.9
SF3B1-201ENST00000335508 GLYCTKQ8IVS8 523 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 MED10Q9BTT4 135 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 ZNF518BQ9C0D4 1074 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 SMIM22K7EJ46 135 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 PFDN6O15212 129 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 GPR182O15218 404 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 SP3Q02447 781 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 PLA2G4FQ68DD2 849 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 PDIK1LQ8N165 341 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 KIF12Q96FN5 646 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 WNK4Q96J92 1243 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 APBA2Q99767 749 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 AGAP1Q9UPQ3 857 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 A8MXQ7 604 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 PGK2P07205 417 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 MCF2P10911 925 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 C12orf56Q8IXR9 622 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 PRPF31Q8WWY3 499 aaKnown RBP7.34□□□□□ -1.23
SF3B1-201ENST00000335508 SH2D3AQ9BRG2 576 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 C11orf70Q9BRQ4 267 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 TMEM132DQ14C87 1099 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 VEPH1Q14D04 833 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 ILDR1Q86SU0 546 aaPredicted RBP7.34□□□□□ -1.23
SF3B1-201ENST00000335508 C18orf8Q96DM3 657 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 HEXIM2Q96MH2 286 aaKnown RBP7.34□□□□□ -1.23
SF3B1-201ENST00000335508 ZBED2Q9BTP6 218 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 UNC45AQ9H3U1 944 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 HMX1Q9NP08 348 aaPredicted RBP7.34□□□□□ -1.23
SF3B1-201ENST00000335508 PYCARDQ9ULZ3 195 aa7.34□□□□□ -1.23
SF3B1-201ENST00000335508 SPATA31C2B4DYI2 1134 aa7.34□□□□□ -1.24
SF3B1-201ENST00000335508 PODXLO00592 558 aa7.34□□□□□ -1.24
SF3B1-201ENST00000335508 ACTN1P12814 892 aa7.34□□□□□ -1.24
SF3B1-201ENST00000335508 KRT10P13645 584 aa7.34□□□□□ -1.24
SF3B1-201ENST00000335508 ICAM3P32942 547 aa7.34□□□□□ -1.24
SF3B1-201ENST00000335508 POU5F1Q01860 360 aaKnown RBP7.34□□□□□ -1.24
SF3B1-201ENST00000335508 TMEM132BQ14DG7 1078 aa7.34□□□□□ -1.24
SF3B1-201ENST00000335508 SCYL2Q6P3W7 929 aa7.34□□□□□ -1.24
SF3B1-201ENST00000335508 TRIM65Q6PJ69 517 aa7.34□□□□□ -1.24
SF3B1-201ENST00000335508 SV2AQ7L0J3 742 aa7.34□□□□□ -1.24
SF3B1-201ENST00000335508 BRSK2Q8IWQ3 736 aa7.34□□□□□ -1.24
SF3B1-201ENST00000335508 NT5C1AQ9BXI3 368 aa7.34□□□□□ -1.24
SF3B1-201ENST00000335508 CARD9Q9H257 536 aa7.34□□□□□ -1.24
SF3B1-201ENST00000335508 PHLPP1O60346 1717 aa7.33□□□□□ -1.24
SF3B1-201ENST00000335508 PARP4Q9UKK3 1724 aaKnown RBP7.33□□□□□ -1.24
SF3B1-201ENST00000335508 HLA-DRAP01903 254 aa7.33□□□□□ -1.24
SF3B1-201ENST00000335508 SKIDA1Q1XH10 827 aa7.33□□□□□ -1.24
SF3B1-201ENST00000335508 EARS2Q5JPH6 523 aaKnown RBP7.33□□□□□ -1.24
SF3B1-201ENST00000335508 MPZL3Q6UWV2 235 aa7.33□□□□□ -1.24
SF3B1-201ENST00000335508 SLC30A10Q6XR72 485 aa7.33□□□□□ -1.24
SF3B1-201ENST00000335508 EFCAB13Q8IY85 973 aa7.33□□□□□ -1.24
SF3B1-201ENST00000335508 DCP1BQ8IZD4 617 aaKnown RBP7.33□□□□□ -1.24
SF3B1-201ENST00000335508 NME8Q8N427 588 aa7.33□□□□□ -1.24
SF3B1-201ENST00000335508 TMX1Q9H3N1 280 aa7.33□□□□□ -1.24
SF3B1-201ENST00000335508 POLD4Q9HCU8 107 aa7.33□□□□□ -1.24
SF3B1-201ENST00000335508 UBN1Q9NPG3 1134 aa7.33□□□□□ -1.24
SF3B1-201ENST00000335508 MED4Q9NPJ6 270 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms