RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ERVK-5Q9HDB9 667 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 SQORQ9Y6N5 450 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 SLC16A3O15427 465 aaKnown RBP23.48■■□□□ 1.35
TPM1-204ENST00000334895 TMEM132AQ24JP5 1023 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 BORCS6Q96GS4 357 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 TCHPQ9BT92 498 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 HIPK3Q9H422 1215 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 AGO2Q9UKV8 859 aaKnown RBP23.48■■□□□ 1.35
TPM1-204ENST00000334895 PADI3Q9ULW8 664 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 PIN4Q9Y237 131 aaKnown RBP23.48■■□□□ 1.35
TPM1-204ENST00000334895 ADRB2P07550 413 aa23.47■■□□□ 1.35
TPM1-204ENST00000334895 CLTBP09497 229 aa23.47■■□□□ 1.35
TPM1-204ENST00000334895 HARSP12081 509 aaKnown RBP23.47■■□□□ 1.35
TPM1-204ENST00000334895 AXLP30530 894 aa23.47■■□□□ 1.35
TPM1-204ENST00000334895 MARSP56192 900 aaKnown RBP23.47■■□□□ 1.35
TPM1-204ENST00000334895 NOLC1Q14978 699 aaKnown RBP eCLIP23.47■■□□□ 1.35
TPM1-204ENST00000334895 CRELD2Q6UXH1 353 aaPredicted RBP23.47■■□□□ 1.35
TPM1-204ENST00000334895 CBWD2Q8IUF1 395 aa23.47■■□□□ 1.35
TPM1-204ENST00000334895 GPD1LQ8N335 351 aa23.47■■□□□ 1.35
TPM1-204ENST00000334895 MKNK1Q9BUB5 465 aa23.47■■□□□ 1.35
TPM1-204ENST00000334895 WNT8AQ9H1J5 351 aa23.47■■□□□ 1.35
TPM1-204ENST00000334895 N4BP3O15049 544 aa23.46■■□□□ 1.35
TPM1-204ENST00000334895 EEF1GP26641 437 aaKnown RBP23.46■■□□□ 1.35
TPM1-204ENST00000334895 PSMC2P35998 433 aaKnown RBP23.46■■□□□ 1.35
TPM1-204ENST00000334895 MATR3P43243 847 aaKnown RBP eCLIP23.46■■□□□ 1.35
TPM1-204ENST00000334895 KRT31Q15323 416 aa23.46■■□□□ 1.35
TPM1-204ENST00000334895 SEZ6Q53EL9 994 aa23.46■■□□□ 1.35
TPM1-204ENST00000334895 NOTUMQ6P988 496 aa23.46■■□□□ 1.35
TPM1-204ENST00000334895 FAM114A1Q8IWE2 563 aa23.46■■□□□ 1.35
TPM1-204ENST00000334895 CEP120Q8N960 986 aa23.46■■□□□ 1.35
TPM1-204ENST00000334895 RDH13Q8NBN7 331 aa23.46■■□□□ 1.35
TPM1-204ENST00000334895 DPF3Q92784 378 aa23.46■■□□□ 1.35
TPM1-204ENST00000334895 PPP1R12CQ9BZL4 782 aa23.46■■□□□ 1.35
TPM1-204ENST00000334895 TMX1Q9H3N1 280 aa23.46■■□□□ 1.35
TPM1-204ENST00000334895 LIMA1Q9UHB6 759 aaKnown RBP23.46■■□□□ 1.35
TPM1-204ENST00000334895 SCN5AQ14524 2016 aa23.46■■□□□ 1.35
TPM1-204ENST00000334895 KIAA0391O15091 583 aaKnown RBP23.45■■□□□ 1.34
TPM1-204ENST00000334895 EXTL3O43909 919 aa23.45■■□□□ 1.34
TPM1-204ENST00000334895 NBNO60934 754 aa23.45■■□□□ 1.34
TPM1-204ENST00000334895 GNA14O95837 355 aa23.45■■□□□ 1.34
TPM1-204ENST00000334895 CDK11BP21127 795 aaKnown RBP23.45■■□□□ 1.34
TPM1-204ENST00000334895 NFX1Q12986 1120 aaKnown RBP23.45■■□□□ 1.34
TPM1-204ENST00000334895 PAK2Q13177 524 aa23.45■■□□□ 1.34
TPM1-204ENST00000334895 SNRNP35Q16560 246 aaKnown RBP23.45■■□□□ 1.34
TPM1-204ENST00000334895 UBXN11Q5T124 520 aa23.45■■□□□ 1.34
TPM1-204ENST00000334895 FAM186BQ8IYM0 893 aa23.45■■□□□ 1.34
TPM1-204ENST00000334895 USP38Q8NB14 1042 aa23.45■■□□□ 1.34
TPM1-204ENST00000334895 FAM213AQ9BRX8 229 aa23.45■■□□□ 1.34
TPM1-204ENST00000334895 EIF2AQ9BY44 585 aaKnown RBP23.45■■□□□ 1.34
TPM1-204ENST00000334895 TMEM39AQ9NV64 488 aa23.45■■□□□ 1.34
TPM1-204ENST00000334895 FRMD4BQ9Y2L6 1034 aa23.45■■□□□ 1.34
TPM1-204ENST00000334895 GPR182O15218 404 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 OGTO15294 1046 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 MCF2P10911 925 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 EPB41P11171 864 aaKnown RBP23.44■■□□□ 1.34
TPM1-204ENST00000334895 CYP2C18P33260 490 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 ACOT2P49753 483 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 MRE11P49959 708 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 FANCCQ00597 558 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 SPAG1Q07617 926 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 NCBP1Q09161 790 aaKnown RBP23.44■■□□□ 1.34
TPM1-204ENST00000334895 CCDC40Q4G0X9 1142 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 SLC27A1Q6PCB7 646 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 FRMD5Q7Z6J6 570 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 CREBRFQ8IUR6 639 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 TRIM59Q8IWR1 403 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 MAGEC2Q9UBF1 373 aaPredicted RBP23.44■■□□□ 1.34
TPM1-204ENST00000334895 LRRC10BA6NIK2 292 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 MAPK13O15264 365 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 TNFSF9P41273 254 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 SARM1Q6SZW1 724 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 PLEKHO2Q8TD55 490 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 SCLYQ96I15 445 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 TAB2Q9NYJ8 693 aa23.44■■□□□ 1.34
TPM1-204ENST00000334895 TRIM43BA6NCK2 446 aa23.43■■□□□ 1.34
TPM1-204ENST00000334895 EVI5O60447 810 aa23.43■■□□□ 1.34
TPM1-204ENST00000334895 NPTXRO95502 500 aa23.43■■□□□ 1.34
TPM1-204ENST00000334895 CCL23P55773 120 aa23.43■■□□□ 1.34
TPM1-204ENST00000334895 DSC3Q14574 896 aa23.43■■□□□ 1.34
TPM1-204ENST00000334895 TMEM192Q8IY95 271 aa23.43■■□□□ 1.34
TPM1-204ENST00000334895 THNSL1Q8IYQ7 743 aa23.43■■□□□ 1.34
TPM1-204ENST00000334895 C7orf61Q8IZ16 206 aa23.43■■□□□ 1.34
TPM1-204ENST00000334895 TRIM43Q96BQ3 446 aaPredicted RBP23.43■■□□□ 1.34
TPM1-204ENST00000334895 ARMCX3Q9UH62 379 aaPredicted RBP23.43■■□□□ 1.34
TPM1-204ENST00000334895 CPSF3Q9UKF6 684 aaKnown RBP23.43■■□□□ 1.34
TPM1-204ENST00000334895 CEP290O15078 2479 aa23.43■■□□□ 1.34
TPM1-204ENST00000334895 TET1Q8NFU7 2136 aa23.43■■□□□ 1.34
TPM1-204ENST00000334895 MGEA5O60502 916 aa23.42■■□□□ 1.34
TPM1-204ENST00000334895 LDHAP00338 332 aaKnown RBP23.42■■□□□ 1.34
TPM1-204ENST00000334895 ITGB8P26012 769 aa23.42■■□□□ 1.34
TPM1-204ENST00000334895 MTIF2P46199 727 aaKnown RBP23.42■■□□□ 1.34
TPM1-204ENST00000334895 COPB1P53618 953 aaKnown RBP23.42■■□□□ 1.34
TPM1-204ENST00000334895 WNT7BP56706 349 aa23.42■■□□□ 1.34
TPM1-204ENST00000334895 DCAF4L1Q3SXM0 396 aa23.42■■□□□ 1.34
TPM1-204ENST00000334895 CCDC51Q96ER9 411 aa23.42■■□□□ 1.34
TPM1-204ENST00000334895 MFSD14AQ96MC6 490 aa23.42■■□□□ 1.34
TPM1-204ENST00000334895 NAP1L5Q96NT1 182 aaPredicted RBP23.42■■□□□ 1.34
TPM1-204ENST00000334895 ADPGKQ9BRR6 497 aa23.42■■□□□ 1.34
TPM1-204ENST00000334895 TUBGCP2Q9BSJ2 902 aa23.42■■□□□ 1.34
TPM1-204ENST00000334895 KIAA1586Q9HCI6 787 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms