RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 FOXR2Q6PJQ5 311 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 ZNF365Q70YC5 407 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 SLC9A9Q8IVB4 645 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 ZC3H3Q8IXZ2 948 aaKnown RBP19.13■□□□□ 0.65
CHGA-202ENST00000334654 CRIPAKQ8N1N5 446 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 CEP120Q8N960 986 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 SMG8Q8ND04 991 aaKnown RBP19.13■□□□□ 0.65
CHGA-202ENST00000334654 PCIF1Q9H4Z3 704 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 ANKFY1Q9P2R3 1169 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 RWDD2AQ9UIY3 292 aa19.13■□□□□ 0.65
CHGA-202ENST00000334654 TRIP11Q15643 1979 aa19.12■□□□□ 0.65
CHGA-202ENST00000334654 A0A0U1RQF3 1178 aa19.12■□□□□ 0.65
CHGA-202ENST00000334654 ZNF623O75123 536 aa19.12■□□□□ 0.65
CHGA-202ENST00000334654 ATF7P17544 494 aaPredicted RBP19.12■□□□□ 0.65
CHGA-202ENST00000334654 NOLC1Q14978 699 aaKnown RBP eCLIP19.12■□□□□ 0.65
CHGA-202ENST00000334654 TMEM132AQ24JP5 1023 aa19.12■□□□□ 0.65
CHGA-202ENST00000334654 EDRF1Q3B7T1 1238 aa19.12■□□□□ 0.65
CHGA-202ENST00000334654 ZBTB41Q5SVQ8 909 aa19.12■□□□□ 0.65
CHGA-202ENST00000334654 LRSAM1Q6UWE0 723 aa19.12■□□□□ 0.65
CHGA-202ENST00000334654 CRELD2Q6UXH1 353 aaPredicted RBP19.12■□□□□ 0.65
CHGA-202ENST00000334654 HS2ST1Q7LGA3 356 aa19.12■□□□□ 0.65
CHGA-202ENST00000334654 MRPL10Q7Z7H8 261 aaKnown RBP19.12■□□□□ 0.65
CHGA-202ENST00000334654 POMGNT1Q8WZA1 660 aa19.12■□□□□ 0.65
CHGA-202ENST00000334654 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.12■□□□□ 0.65
CHGA-202ENST00000334654 TCHPQ9BT92 498 aa19.12■□□□□ 0.65
CHGA-202ENST00000334654 FAM105AQ9NUU6 356 aa19.12■□□□□ 0.65
CHGA-202ENST00000334654 PTPRSQ13332 1948 aa19.12■□□□□ 0.65
CHGA-202ENST00000334654 MEFVO15553 781 aaPredicted RBP19.11■□□□□ 0.65
CHGA-202ENST00000334654 CALUO43852 315 aaPredicted RBP19.11■□□□□ 0.65
CHGA-202ENST00000334654 NR3C1P04150 777 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 MAGEA10P43363 369 aaPredicted RBP19.11■□□□□ 0.65
CHGA-202ENST00000334654 LRRC63Q05C16 580 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 IKBKEQ14164 716 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 DCAF4L1Q3SXM0 396 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 SEZ6Q53EL9 994 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 ARMCX5Q6P1M9 558 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 SLC24A5Q71RS6 500 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 ZNF598Q86UK7 904 aaKnown RBP19.11■□□□□ 0.65
CHGA-202ENST00000334654 TMEM192Q8IY95 271 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 GOLGA5Q8TBA6 731 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 FBXL18Q96ME1 805 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 LBHD1Q9BQE6 289 aaPredicted RBP19.11■□□□□ 0.65
CHGA-202ENST00000334654 ADPGKQ9BRR6 497 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 RNF39Q9H2S5 420 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 HSPBP1Q9NZL4 362 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 DACH1Q9UI36 760 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 AGO2Q9UKV8 859 aaKnown RBP19.11■□□□□ 0.65
CHGA-202ENST00000334654 HES2Q9Y543 173 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 IPPQ9Y573 584 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 PCDHB2Q9Y5E7 798 aa19.11■□□□□ 0.65
CHGA-202ENST00000334654 ABHD14A-ACY1A0A1B0GW23 586 aa19.1■□□□□ 0.65
CHGA-202ENST00000334654 H0YGN5 161 aa19.1■□□□□ 0.65
CHGA-202ENST00000334654 CITO14578 2027 aa19.1■□□□□ 0.65
CHGA-202ENST00000334654 OGTO15294 1046 aa19.1■□□□□ 0.65
CHGA-202ENST00000334654 FGBP02675 491 aa19.1■□□□□ 0.65
CHGA-202ENST00000334654 MYBPC2Q14324 1141 aa19.1■□□□□ 0.65
CHGA-202ENST00000334654 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.1■□□□□ 0.65
CHGA-202ENST00000334654 LRRC55Q6ZSA7 311 aa19.1■□□□□ 0.65
CHGA-202ENST00000334654 ECHDC2Q86YB7 292 aa19.1■□□□□ 0.65
CHGA-202ENST00000334654 SAAL1Q96ER3 474 aa19.1■□□□□ 0.65
CHGA-202ENST00000334654 MSTO1Q9BUK6 570 aa19.1■□□□□ 0.65
CHGA-202ENST00000334654 NXF3Q9H4D5 531 aaKnown RBP19.1■□□□□ 0.65
CHGA-202ENST00000334654 C1orf112Q9NSG2 853 aa19.1■□□□□ 0.65
CHGA-202ENST00000334654 ANK1P16157 1881 aa19.1■□□□□ 0.65
CHGA-202ENST00000334654 GOLGA8IPA6NC78 632 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 GOLGA8JA6NMD2 632 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 MEIS3P2A8K0S8 358 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 HARSP12081 509 aaKnown RBP19.09■□□□□ 0.65
CHGA-202ENST00000334654 TNFSF9P41273 254 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 GRM5P41594 1212 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 CASP4P49662 377 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 CYP2J2P51589 502 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 OTOP2Q7RTS6 562 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 THNSL1Q8IYQ7 743 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 EEF2KMTQ96G04 330 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 GDF15Q99988 308 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 CPSF3Q9UKF6 684 aaKnown RBP19.09■□□□□ 0.65
CHGA-202ENST00000334654 BICDL2A1A5D9 508 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 KIAA0391O15091 583 aaKnown RBP19.09■□□□□ 0.65
CHGA-202ENST00000334654 BAIAP3O94812 1187 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 STAG3L1P0CL83 205 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 NR2F2P24468 414 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 MATR3P43243 847 aaKnown RBP eCLIP19.09■□□□□ 0.65
CHGA-202ENST00000334654 ACOT2P49753 483 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 RAB27AP51159 221 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 WDR5P61964 334 aaKnown RBP19.09■□□□□ 0.65
CHGA-202ENST00000334654 ADAM9Q13443 819 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 NCAPHQ15003 741 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 PSRC1Q6PGN9 363 aaPredicted RBP19.09■□□□□ 0.65
CHGA-202ENST00000334654 AGMOQ6ZNB7 445 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 XXYLT1Q8NBI6 393 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 ENOX1Q8TC92 643 aaKnown RBP19.09■□□□□ 0.65
CHGA-202ENST00000334654 TSG101Q99816 390 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 BPIFA3Q9BQP9 254 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 SNTG2Q9NY99 539 aa19.09■□□□□ 0.65
CHGA-202ENST00000334654 EXTL3O43909 919 aa19.08■□□□□ 0.64
CHGA-202ENST00000334654 AKAP3O75969 853 aa19.08■□□□□ 0.64
CHGA-202ENST00000334654 OSTNP61366 133 aa19.08■□□□□ 0.64
CHGA-202ENST00000334654 FKBP3Q00688 224 aaKnown RBP19.08■□□□□ 0.64
CHGA-202ENST00000334654 IQCB1Q15051 598 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 250.8 ms