RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 BBOX1O75936 387 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 PYGLP06737 847 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 BLMHQ13867 455 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 AKT1S1Q96B36 256 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 TMEM109Q9BVC6 243 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 ZFATQ9P243 1243 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 CENPFP49454 3210 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 THAP12O43422 761 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 PPP1R11O60927 126 aaPredicted RBP14.71□□□□□ -0.05
SYNE3-201ENST00000334258 FAM13AO94988 1023 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 COILP38432 576 aaPredicted RBP14.71□□□□□ -0.05
SYNE3-201ENST00000334258 FMO5P49326 533 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 RAD23BP54727 409 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 RWDD2BP57060 319 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 PPP4CP60510 307 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 KYNUQ16719 465 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 CNKSR1Q969H4 720 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 ZSWIM1Q9BR11 485 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 MTMR4Q9NYA4 1195 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 PCYOX1Q9UHG3 505 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 ASTN1O14525 1302 aa14.71□□□□□ -0.05
SYNE3-201ENST00000334258 CCDC88AQ3V6T2 1871 aa14.71□□□□□ -0.06
SYNE3-201ENST00000334258 GSTTP1A0A1W2PQM5 241 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 A0A1W2PRG0 241 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 O00370 1275 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 FOXN3O00409 490 aaPredicted RBP14.7□□□□□ -0.06
SYNE3-201ENST00000334258 PYGMP11217 842 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 RBBP5Q15291 538 aaKnown RBP14.7□□□□□ -0.06
SYNE3-201ENST00000334258 TRMT10CQ7L0Y3 403 aaKnown RBP14.7□□□□□ -0.06
SYNE3-201ENST00000334258 SLC20A1Q8WUM9 679 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 C1orf54Q8WWF1 131 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 FRMD4BQ9Y2L6 1034 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 SLC16A3O15427 465 aaKnown RBP14.7□□□□□ -0.06
SYNE3-201ENST00000334258 SMIM24O75264 130 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 OAS1P00973 400 aaKnown RBP14.7□□□□□ -0.06
SYNE3-201ENST00000334258 NMT1P30419 496 aaKnown RBP14.7□□□□□ -0.06
SYNE3-201ENST00000334258 RPS6KA3P51812 740 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 RNASELQ05823 741 aaKnown RBP14.7□□□□□ -0.06
SYNE3-201ENST00000334258 ZC2HC1CQ53FD0 456 aaPredicted RBP14.7□□□□□ -0.06
SYNE3-201ENST00000334258 CDCA2Q69YH5 1023 aaPredicted RBP14.7□□□□□ -0.06
SYNE3-201ENST00000334258 MFSD5Q6N075 450 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 LMNTD2Q8IXW0 634 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 ZDHHC14Q8IZN3 488 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 CKAP2Q8WWK9 683 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 RUSC1Q9BVN2 902 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 INTS2Q9H0H0 1204 aaKnown RBP14.7□□□□□ -0.06
SYNE3-201ENST00000334258 LAMB2P55268 1798 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 TAF1LQ8IZX4 1826 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 ATMINO43313 823 aaPredicted RBP14.7□□□□□ -0.06
SYNE3-201ENST00000334258 MXRA7P84157 204 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 C1QTNF12Q5T7M4 302 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 ZNF449Q6P9G9 518 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 VSTM1Q6UX27 236 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 ARHGEF18Q6ZSZ5 1173 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 HS2ST1Q7LGA3 356 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 SLFN12Q8IYM2 578 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 SERPINB12Q96P63 405 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 TMEM237Q96Q45 408 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 TMX4Q9H1E5 349 aaPredicted RBP14.7□□□□□ -0.06
SYNE3-201ENST00000334258 TXLNGQ9NUQ3 528 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 IRS2Q9Y4H2 1338 aa14.7□□□□□ -0.06
SYNE3-201ENST00000334258 GTPBP10A4D1E9 387 aaKnown RBP14.69□□□□□ -0.06
SYNE3-201ENST00000334258 ATP2B4P23634 1241 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 ABL2P42684 1182 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 CTCFP49711 727 aaPredicted RBP14.69□□□□□ -0.06
SYNE3-201ENST00000334258 AOC3Q16853 763 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 CBWD6Q4V339 395 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 CBWD3Q5JTY5 395 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 CBWD5Q5RIA9 395 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 ZFPM1Q8IX07 1006 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 SYT2Q8N9I0 419 aaPredicted RBP14.69□□□□□ -0.06
SYNE3-201ENST00000334258 ART4Q93070 314 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 ERP27Q96DN0 273 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 NAP1L4Q99733 375 aaKnown RBP14.69□□□□□ -0.06
SYNE3-201ENST00000334258 AGPAT1Q99943 283 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 PCDHA1Q9Y5I3 950 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 RREB1Q92766 1687 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 SNUPNO95149 360 aaKnown RBP14.69□□□□□ -0.06
SYNE3-201ENST00000334258 ZBTB7AO95365 584 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 GJB6O95452 261 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 DLATP10515 647 aaKnown RBP14.69□□□□□ -0.06
SYNE3-201ENST00000334258 AKR1B1P15121 316 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 NFIAQ12857 509 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 MPP2Q14168 576 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 RRP1BQ14684 758 aaKnown RBP14.69□□□□□ -0.06
SYNE3-201ENST00000334258 DNAJC14Q6Y2X3 702 aaPredicted RBP14.69□□□□□ -0.06
SYNE3-201ENST00000334258 PIGOQ8TEQ8 1089 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 BTBD6Q96KE9 485 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 ANO3Q9BYT9 981 aa14.69□□□□□ -0.06
SYNE3-201ENST00000334258 UBE2TQ9NPD8 197 aaPredicted RBP14.69□□□□□ -0.06
SYNE3-201ENST00000334258 NKX1-2Q9UD57 310 aaPredicted RBP14.69□□□□□ -0.06
SYNE3-201ENST00000334258 UNC5CO95185 931 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 TARSP26639 723 aaKnown RBP14.68□□□□□ -0.06
SYNE3-201ENST00000334258 GPC5P78333 572 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 MYL7Q01449 175 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 ZNF543Q08ER8 600 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 COG2Q14746 738 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 ECHDC2Q86YB7 292 aa14.68□□□□□ -0.06
SYNE3-201ENST00000334258 SLC13A5Q86YT5 568 aaPredicted RBP14.68□□□□□ -0.06
SYNE3-201ENST00000334258 NUDCD1Q96RS6 583 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms