RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 SPAG1Q07617 926 aa18.05■□□□□ 0.48
SHOX-201ENST00000334060 FAM213AQ9BRX8 229 aa18.05■□□□□ 0.48
SHOX-201ENST00000334060 TCHPQ9BT92 498 aa18.05■□□□□ 0.48
SHOX-201ENST00000334060 APOL6Q9BWW8 343 aa18.05■□□□□ 0.48
SHOX-201ENST00000334060 PDCL3Q9H2J4 239 aa18.05■□□□□ 0.48
SHOX-201ENST00000334060 UBE4BO95155 1302 aa18.05■□□□□ 0.48
SHOX-201ENST00000334060 LTBP2Q14767 1821 aa18.05■□□□□ 0.48
SHOX-201ENST00000334060 A0A0B4J269 797 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 TIMP1P01033 207 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 RAG1P15918 1043 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 AKAP5P24588 427 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 DLG4P78352 724 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 CEP135Q66GS9 1140 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 LMBRD2Q68DH5 695 aaPredicted RBP18.04■□□□□ 0.48
SHOX-201ENST00000334060 CREBRFQ8IUR6 639 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 CSGALNACT2Q8N6G5 542 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 SMG8Q8ND04 991 aaKnown RBP18.04■□□□□ 0.48
SHOX-201ENST00000334060 ELMO3Q96BJ8 720 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 TMEM206Q9H813 350 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 DMAC2Q9NW81 257 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 TNFSF13BQ9Y275 285 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 STYXL1Q9Y6J8 313 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 PTPRJQ12913 1337 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 TOM1L1O75674 476 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 ATF7P17544 494 aaPredicted RBP18.04■□□□□ 0.48
SHOX-201ENST00000334060 ERCC5P28715 1186 aaPredicted RBP18.04■□□□□ 0.48
SHOX-201ENST00000334060 ADAM9Q13443 819 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 DSC3Q14574 896 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 PLEKHG4Q58EX7 1191 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 MPZL3Q6UWV2 235 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 FAM200AQ8TCP9 573 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 HVCN1Q96D96 273 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 POP1Q99575 1024 aaKnown RBP18.04■□□□□ 0.48
SHOX-201ENST00000334060 ADAM2Q99965 735 aa18.04■□□□□ 0.48
SHOX-201ENST00000334060 TOPORSQ9NS56 1045 aaPredicted RBP18.04■□□□□ 0.48
SHOX-201ENST00000334060 MYL5Q02045 173 aa18.03■□□□□ 0.48
SHOX-201ENST00000334060 MCL1Q07820 350 aa18.03■□□□□ 0.48
SHOX-201ENST00000334060 STIM1Q13586 685 aa18.03■□□□□ 0.48
SHOX-201ENST00000334060 ALCAMQ13740 583 aa18.03■□□□□ 0.48
SHOX-201ENST00000334060 TWF2Q6IBS0 349 aaKnown RBP18.03■□□□□ 0.48
SHOX-201ENST00000334060 ZPBP2Q6X784 338 aa18.03■□□□□ 0.48
SHOX-201ENST00000334060 ZC3H3Q8IXZ2 948 aaKnown RBP18.03■□□□□ 0.48
SHOX-201ENST00000334060 ENOX1Q8TC92 643 aaKnown RBP18.03■□□□□ 0.48
SHOX-201ENST00000334060 DPF3Q92784 378 aa18.03■□□□□ 0.48
SHOX-201ENST00000334060 MSTO1Q9BUK6 570 aa18.03■□□□□ 0.48
SHOX-201ENST00000334060 SEZ6LQ9BYH1 1024 aa18.03■□□□□ 0.48
SHOX-201ENST00000334060 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.02■□□□□ 0.48
SHOX-201ENST00000334060 CLDN3O15551 220 aa18.02■□□□□ 0.48
SHOX-201ENST00000334060 CAND2O75155 1236 aa18.02■□□□□ 0.48
SHOX-201ENST00000334060 LRRN2O75325 713 aa18.02■□□□□ 0.48
SHOX-201ENST00000334060 GATMP50440 423 aa18.02■□□□□ 0.48
SHOX-201ENST00000334060 NOLC1Q14978 699 aaKnown RBP eCLIP18.02■□□□□ 0.48
SHOX-201ENST00000334060 SPATA1Q5VX52 437 aa18.02■□□□□ 0.48
SHOX-201ENST00000334060 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.02■□□□□ 0.48
SHOX-201ENST00000334060 STXBP4Q6ZWJ1 553 aa18.02■□□□□ 0.48
SHOX-201ENST00000334060 PRIMPOLQ96LW4 560 aa18.02■□□□□ 0.48
SHOX-201ENST00000334060 SNTG2Q9NY99 539 aa18.02■□□□□ 0.48
SHOX-201ENST00000334060 KLK14Q9P0G3 267 aa18.02■□□□□ 0.48
SHOX-201ENST00000334060 CACNG4Q9UBN1 327 aa18.02■□□□□ 0.48
SHOX-201ENST00000334060 AGO2Q9UKV8 859 aaKnown RBP18.02■□□□□ 0.48
SHOX-201ENST00000334060 H0YCG3 227 aa18.02■□□□□ 0.47
SHOX-201ENST00000334060 EVI5O60447 810 aa18.02■□□□□ 0.47
SHOX-201ENST00000334060 TRIM49P0CI25 452 aa18.02■□□□□ 0.47
SHOX-201ENST00000334060 TRIM49CP0CI26 452 aa18.02■□□□□ 0.47
SHOX-201ENST00000334060 CXCL8P10145 99 aa18.02■□□□□ 0.47
SHOX-201ENST00000334060 CCDC155Q8N6L0 562 aa18.02■□□□□ 0.47
SHOX-201ENST00000334060 SLC17A8Q8NDX2 589 aa18.02■□□□□ 0.47
SHOX-201ENST00000334060 IPPQ9Y573 584 aa18.02■□□□□ 0.47
SHOX-201ENST00000334060 ESPNB1AK53 854 aa18.01■□□□□ 0.47
SHOX-201ENST00000334060 EXOC3O60645 756 aa18.01■□□□□ 0.47
SHOX-201ENST00000334060 CXCL10P02778 98 aa18.01■□□□□ 0.47
SHOX-201ENST00000334060 CDC42EP1Q00587 391 aa18.01■□□□□ 0.47
SHOX-201ENST00000334060 LRRC63Q05C16 580 aa18.01■□□□□ 0.47
SHOX-201ENST00000334060 C1orf220Q5T0J3 134 aa18.01■□□□□ 0.47
SHOX-201ENST00000334060 CDKAL1Q5VV42 579 aa18.01■□□□□ 0.47
SHOX-201ENST00000334060 HS2ST1Q7LGA3 356 aa18.01■□□□□ 0.47
SHOX-201ENST00000334060 RNF169Q8NCN4 708 aa18.01■□□□□ 0.47
SHOX-201ENST00000334060 BPIFA3Q9BQP9 254 aa18.01■□□□□ 0.47
SHOX-201ENST00000334060 HCSTQ9UBK5 93 aa18.01■□□□□ 0.47
SHOX-201ENST00000334060 EXOC7Q9UPT5 735 aa18.01■□□□□ 0.47
SHOX-201ENST00000334060 GPR182O15218 404 aa18■□□□□ 0.47
SHOX-201ENST00000334060 CALUO43852 315 aaPredicted RBP18■□□□□ 0.47
SHOX-201ENST00000334060 ZNF18P17022 549 aa18■□□□□ 0.47
SHOX-201ENST00000334060 IGFBP6P24592 240 aaPredicted RBP18■□□□□ 0.47
SHOX-201ENST00000334060 ENOX2Q16206 610 aaKnown RBP18■□□□□ 0.47
SHOX-201ENST00000334060 EDRF1Q3B7T1 1238 aa18■□□□□ 0.47
SHOX-201ENST00000334060 MFSD5Q6N075 450 aa18■□□□□ 0.47
SHOX-201ENST00000334060 NOTUMQ6P988 496 aa18■□□□□ 0.47
SHOX-201ENST00000334060 SLC27A1Q6PCB7 646 aa18■□□□□ 0.47
SHOX-201ENST00000334060 APTXQ7Z2E3 356 aaKnown RBP18■□□□□ 0.47
SHOX-201ENST00000334060 BORCS6Q96GS4 357 aa18■□□□□ 0.47
SHOX-201ENST00000334060 CNOT6LQ96LI5 555 aaKnown RBP18■□□□□ 0.47
SHOX-201ENST00000334060 ZFP42Q96MM3 310 aa18■□□□□ 0.47
SHOX-201ENST00000334060 DACH1Q9UI36 760 aa18■□□□□ 0.47
SHOX-201ENST00000334060 PLAGL2Q9UPG8 496 aa18■□□□□ 0.47
SHOX-201ENST00000334060 STAG3L1P0CL83 205 aa18■□□□□ 0.47
SHOX-201ENST00000334060 FKBP3Q00688 224 aaKnown RBP18■□□□□ 0.47
SHOX-201ENST00000334060 SNRNP35Q16560 246 aaKnown RBP18■□□□□ 0.47
SHOX-201ENST00000334060 GLRA4Q5JXX5 417 aa18■□□□□ 0.47
SHOX-201ENST00000334060 OTOP2Q7RTS6 562 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms