RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 SWSAP1Q6NVH7 229 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 MDM1Q8TC05 714 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 RFFLQ8WZ73 363 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 MAGOHBQ96A72 148 aaKnown RBP20.5■□□□□ 0.87
LAMP1-201ENST00000332556 SYNPO2Q9UMS6 1093 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 NPTX2P47972 431 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 MXI1P50539 228 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 SLFN11Q7Z7L1 901 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 TATDN2Q93075 761 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 HES6Q96HZ4 224 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 CEP170P1Q96L14 293 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 CXorf56Q9H5V9 222 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 TCRBV7S2A1N4TA0A589 114 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 BTNL10A8MVZ5 291 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 VWA5AO00534 786 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 SNRNP35Q16560 246 aaKnown RBP20.5■□□□□ 0.87
LAMP1-201ENST00000332556 IFI16Q16666 785 aaKnown RBP20.5■□□□□ 0.87
LAMP1-201ENST00000332556 ARFGAP2Q8N6H7 521 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 ACTRT1Q8TDG2 376 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 TAS1R2Q8TE23 839 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 RAPGEF5Q92565 580 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 PBKQ96KB5 322 aa20.5■□□□□ 0.87
LAMP1-201ENST00000332556 NFKBIEO00221 500 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 TRAPPC3O43617 180 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 CUL1Q13616 776 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 PPP2R5AQ15172 486 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 KRT71Q3SY84 523 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 LRIG3Q6UXM1 1119 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 UHMK1Q8TAS1 419 aaKnown RBP20.49■□□□□ 0.87
LAMP1-201ENST00000332556 LRRC45Q96CN5 670 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 WRNIP1Q96S55 665 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 HAUS2Q9NVX0 235 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 ALG6Q9Y672 507 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 FER1L6Q2WGJ9 1857 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 PFASO15067 1338 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 HMGB2P26583 209 aaKnown RBP20.49■□□□□ 0.87
LAMP1-201ENST00000332556 CNGA1P29973 690 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 PPATQ06203 517 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 DHX9Q08211 1270 aaKnown RBP20.49■□□□□ 0.87
LAMP1-201ENST00000332556 SEZ6Q53EL9 994 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 SLC39A4Q6P5W5 647 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 MCF2L2Q86YR7 1114 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 ZNF526Q8TF50 670 aaPredicted RBP20.49■□□□□ 0.87
LAMP1-201ENST00000332556 TAOK3Q9H2K8 898 aa20.49■□□□□ 0.87
LAMP1-201ENST00000332556 SUCLA2Q9P2R7 463 aaPredicted RBP20.49■□□□□ 0.87
LAMP1-201ENST00000332556 PLA2G6O60733 806 aa20.48■□□□□ 0.87
LAMP1-201ENST00000332556 RASSF9O75901 435 aa20.48■□□□□ 0.87
LAMP1-201ENST00000332556 RGS20O76081 388 aa20.48■□□□□ 0.87
LAMP1-201ENST00000332556 TMEM253P0C7T8 217 aa20.48■□□□□ 0.87
LAMP1-201ENST00000332556 CHRNB2P17787 502 aa20.48■□□□□ 0.87
LAMP1-201ENST00000332556 SMTNP53814 917 aa20.48■□□□□ 0.87
LAMP1-201ENST00000332556 WNT7BP56706 349 aa20.48■□□□□ 0.87
LAMP1-201ENST00000332556 PPP2R2AP63151 447 aa20.48■□□□□ 0.87
LAMP1-201ENST00000332556 INTS8Q75QN2 995 aaKnown RBP20.48■□□□□ 0.87
LAMP1-201ENST00000332556 KIAA1683Q9H0B3 1180 aa20.48■□□□□ 0.87
LAMP1-201ENST00000332556 ZDHHC14Q8IZN3 488 aa20.48■□□□□ 0.87
LAMP1-201ENST00000332556 SEC16BQ96JE7 1060 aa20.48■□□□□ 0.87
LAMP1-201ENST00000332556 TRIM7Q9C029 511 aa20.48■□□□□ 0.87
LAMP1-201ENST00000332556 KCND2Q9NZV8 630 aa20.48■□□□□ 0.87
LAMP1-201ENST00000332556 PIM2Q9P1W9 311 aa20.48■□□□□ 0.87
LAMP1-201ENST00000332556 KIF13BQ9NQT8 1826 aa20.48■□□□□ 0.87
LAMP1-201ENST00000332556 NR3C2P08235 984 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 BCRP11274 1271 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 C1orf131Q8NDD1 294 aaKnown RBP20.47■□□□□ 0.87
LAMP1-201ENST00000332556 TMEM161BQ8NDZ6 487 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 POMGNT1Q8WZA1 660 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 C18orf8Q96DM3 657 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 TMEM206Q9H813 350 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 SEPT9Q9UHD8 586 aaPredicted RBP20.47■□□□□ 0.87
LAMP1-201ENST00000332556 CNOT7Q9UIV1 285 aaKnown RBP20.47■□□□□ 0.87
LAMP1-201ENST00000332556 TBX20Q9UMR3 447 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 ATP8A1Q9Y2Q0 1164 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 ZBED4O75132 1171 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 PSMC5P62195 406 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 BYSLQ13895 437 aaKnown RBP20.47■□□□□ 0.87
LAMP1-201ENST00000332556 NFIL3Q16649 462 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 FKBP1CQ5VVH2 108 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 TMC3Q7Z5M5 1100 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 CEP57Q86XR8 500 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 FAM213AQ9BRX8 229 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 KMT5AQ9NQR1 393 aa20.47■□□□□ 0.87
LAMP1-201ENST00000332556 GTF2BQ00403 316 aa20.46■□□□□ 0.87
LAMP1-201ENST00000332556 KIF22Q14807 665 aa20.46■□□□□ 0.87
LAMP1-201ENST00000332556 MTERF2Q49AM1 385 aa20.46■□□□□ 0.87
LAMP1-201ENST00000332556 CCDC60Q8IWA6 550 aaPredicted RBP20.46■□□□□ 0.87
LAMP1-201ENST00000332556 LMBR1Q8WVP7 490 aa20.46■□□□□ 0.87
LAMP1-201ENST00000332556 BICD1Q96G01 975 aa20.46■□□□□ 0.87
LAMP1-201ENST00000332556 PSME4Q14997 1843 aa20.46■□□□□ 0.87
LAMP1-201ENST00000332556 WDR64B1ANS9 1081 aa20.46■□□□□ 0.87
LAMP1-201ENST00000332556 RDXP35241 583 aaKnown RBP20.46■□□□□ 0.87
LAMP1-201ENST00000332556 CDR1P51861 262 aa20.46■□□□□ 0.87
LAMP1-201ENST00000332556 SPOPLQ6IQ16 392 aa20.46■□□□□ 0.87
LAMP1-201ENST00000332556 RUFY4Q6ZNE9 571 aa20.46■□□□□ 0.87
LAMP1-201ENST00000332556 NLRX1Q86UT6 975 aa20.46■□□□□ 0.87
LAMP1-201ENST00000332556 SLC9A9Q8IVB4 645 aa20.46■□□□□ 0.87
LAMP1-201ENST00000332556 EPS8L1Q8TE68 723 aa20.46■□□□□ 0.87
LAMP1-201ENST00000332556 PTPN22Q9Y2R2 807 aa20.46■□□□□ 0.87
LAMP1-201ENST00000332556 SNX24Q9Y343 169 aa20.46■□□□□ 0.87
LAMP1-201ENST00000332556 SMIM23A6NLE4 172 aa20.45■□□□□ 0.86
LAMP1-201ENST00000332556 CHUKO15111 745 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms