RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 BAP1Q92560 729 aa10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 IWS1Q96ST2 819 aa10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 CNOT10Q9H9A5 744 aaKnown RBP10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 AGPAT3Q9NRZ7 376 aa10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 CTNNAL1Q9UBT7 734 aa10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 NR2E1Q9Y466 385 aa10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 CSDE1O75534 798 aaKnown RBP10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 NUMBP49757 651 aa10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 RASSF2P50749 326 aa10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 NOP14P78316 857 aaKnown RBP10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 MKRN3Q13064 507 aaKnown RBP10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 GNPTABQ3T906 1256 aa10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 LRRC55Q6ZSA7 311 aa10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 LRRC15Q8TF66 581 aa10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 GRK7Q8WTQ7 553 aa10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 PURBQ96QR8 312 aaKnown RBP10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 MSTO1Q9BUK6 570 aa10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 USH1CQ9Y6N9 552 aa10.48□□□□□ -0.73
CSGALNACT1-201ENST00000332246 I3L4J1 428 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 AGPSO00116 658 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 PODXLO00592 558 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 DLG4P78352 724 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 ZNF844Q08AG5 666 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 DARS2Q6PI48 645 aaKnown RBP10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 RNF169Q8NCN4 708 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 ATXN7L3BQ96GX2 97 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 EDEM3Q9BZQ6 932 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 CXorf56Q9H5V9 222 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 SLITRK6Q9H5Y7 841 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 ACTR5Q9H9F9 607 aaPredicted RBP10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 TOM1L1O75674 476 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 MT-ND3P03897 115 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 TSNAXIP1Q2TAA8 658 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 SLC27A3Q5K4L6 730 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 PPP1R36Q96LQ0 422 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 SHCBP1LQ9BZQ2 653 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 TRIM6Q9C030 488 aaPredicted RBP10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 SMYD3Q9H7B4 428 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 DDX20Q9UHI6 824 aaKnown RBP10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 MON2Q7Z3U7 1717 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 PIK3C2AO00443 1686 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 ARSEP51690 589 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 ITGA8P53708 1063 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 KCNT1Q5JUK3 1230 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 NXNQ6DKJ4 435 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 OR6B2Q6IFH4 312 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 LONP2Q86WA8 852 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 NME8Q8N427 588 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 PPM1NQ8N819 430 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 SYT2Q8N9I0 419 aaPredicted RBP10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 KCTD6Q8NC69 237 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 SLC5A5Q92911 643 aa10.47□□□□□ -0.73
CSGALNACT1-201ENST00000332246 WEE2P0C1S8 567 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 RALAP11233 206 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 YWHABP31946 246 aaKnown RBP10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 CHRNA3P32297 505 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 PPP4CP60510 307 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 GEN1Q17RS7 908 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 SLC35G1Q2M3R5 365 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 P3H1Q32P28 736 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 FAXCQ5TGI0 409 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 KRT39Q6A163 491 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 CYB5D1Q6P9G0 228 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 RNF34Q969K3 372 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 SLC35C1Q96A29 364 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 CCDC124Q96CT7 223 aaKnown RBP10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 DNAJC19Q96DA6 116 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 ERP27Q96DN0 273 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 SPDL1Q96EA4 605 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 RBM15Q96T37 977 aaKnown RBP eCLIP10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 RIOX1Q9H6W3 641 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 TMBIM4Q9HC24 238 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 TNS2Q63HR2 1409 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 POLRMTO00411 1230 aaKnown RBP10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 IGF2BP3O00425 579 aaKnown RBP eCLIP10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 OPHN1O60890 802 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 SMIM24O75264 130 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 CIB2O75838 187 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 PSMA2P25787 234 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 ATXN3P54252 364 aaPredicted RBP10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 BYSLQ13895 437 aaKnown RBP10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 SNRNP35Q16560 246 aaKnown RBP10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 EDRF1Q3B7T1 1238 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 RASIP1Q5U651 963 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 CROCCP2Q86T23 111 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 CCNYQ8ND76 341 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 FBXL13Q8NEE6 735 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 DCAF4Q8WV16 495 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 TATDN2Q93075 761 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 TTC1Q99614 292 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 NPHS2Q9NP85 383 aa10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 PPARGC1AQ9UBK2 798 aaKnown RBP10.46□□□□□ -0.73
CSGALNACT1-201ENST00000332246 UPP2O95045 317 aa10.46□□□□□ -0.74
CSGALNACT1-201ENST00000332246 P4HBP07237 508 aaKnown RBP10.46□□□□□ -0.74
CSGALNACT1-201ENST00000332246 PYGMP11217 842 aa10.46□□□□□ -0.74
CSGALNACT1-201ENST00000332246 DGKZQ13574 1117 aa10.46□□□□□ -0.74
CSGALNACT1-201ENST00000332246 QPCTQ16769 361 aa10.46□□□□□ -0.74
CSGALNACT1-201ENST00000332246 GADL1Q6ZQY3 521 aa10.46□□□□□ -0.74
CSGALNACT1-201ENST00000332246 ERICH1Q86X53 443 aa10.46□□□□□ -0.74
CSGALNACT1-201ENST00000332246 PALB2Q86YC2 1186 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms