RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 FBXL13Q8NEE6 735 aa16.17■□□□□ 0.18
TPM3-205ENST00000328159 SLC30A5Q8TAD4 765 aa16.17■□□□□ 0.18
TPM3-205ENST00000328159 OLIG1Q8TAK6 271 aa16.17■□□□□ 0.18
TPM3-205ENST00000328159 TRAPPC12Q8WVT3 735 aa16.17■□□□□ 0.18
TPM3-205ENST00000328159 EMID1Q96A84 441 aaPredicted RBP16.17■□□□□ 0.18
TPM3-205ENST00000328159 SYT11Q9BT88 431 aa16.17■□□□□ 0.18
TPM3-205ENST00000328159 MSTO1Q9BUK6 570 aa16.17■□□□□ 0.18
TPM3-205ENST00000328159 SUCLA2Q9P2R7 463 aaPredicted RBP16.17■□□□□ 0.18
TPM3-205ENST00000328159 ZNF236Q9UL36 1845 aa16.17■□□□□ 0.18
TPM3-205ENST00000328159 ATP8B3O60423 1300 aa16.17■□□□□ 0.18
TPM3-205ENST00000328159 SLC15A5A6NIM6 579 aa16.16■□□□□ 0.18
TPM3-205ENST00000328159 BTNL10A8MVZ5 291 aa16.16■□□□□ 0.18
TPM3-205ENST00000328159 BUB1O43683 1085 aa16.16■□□□□ 0.18
TPM3-205ENST00000328159 LDHAP00338 332 aaKnown RBP16.16■□□□□ 0.18
TPM3-205ENST00000328159 SRGAP2CP0DJJ0 459 aa16.16■□□□□ 0.18
TPM3-205ENST00000328159 MATR3P43243 847 aaKnown RBP eCLIP16.16■□□□□ 0.18
TPM3-205ENST00000328159 NAP1L1P55209 391 aaKnown RBP16.16■□□□□ 0.18
TPM3-205ENST00000328159 CHADLQ6NUI6 762 aa16.16■□□□□ 0.18
TPM3-205ENST00000328159 ZPBP2Q6X784 338 aa16.16■□□□□ 0.18
TPM3-205ENST00000328159 SV2AQ7L0J3 742 aa16.16■□□□□ 0.18
TPM3-205ENST00000328159 RASAL3Q86YV0 1011 aa16.16■□□□□ 0.18
TPM3-205ENST00000328159 ZBTB8OSQ8IWT0 167 aa16.16■□□□□ 0.18
TPM3-205ENST00000328159 PPTC7Q8NI37 304 aa16.16■□□□□ 0.18
TPM3-205ENST00000328159 LNX1Q8TBB1 728 aaPredicted RBP16.16■□□□□ 0.18
TPM3-205ENST00000328159 TAS1R2Q8TE23 839 aa16.16■□□□□ 0.18
TPM3-205ENST00000328159 U2AF1L4Q8WU68 220 aaKnown RBP16.16■□□□□ 0.18
TPM3-205ENST00000328159 MAP7D2Q96T17 732 aa16.16■□□□□ 0.18
TPM3-205ENST00000328159 CCDC113Q9H0I3 377 aa16.16■□□□□ 0.18
TPM3-205ENST00000328159 ANKFY1Q9P2R3 1169 aa16.16■□□□□ 0.18
TPM3-205ENST00000328159 EVPLQ92817 2033 aa16.16■□□□□ 0.18
TPM3-205ENST00000328159 A0A0B4J269 797 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 ACOT2P49753 483 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 CLDN10P78369 228 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 ZNF484Q5JVG2 852 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 CRELD2Q6UXH1 353 aaPredicted RBP16.15■□□□□ 0.18
TPM3-205ENST00000328159 RNF149Q8NC42 400 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 AFG1LQ8WV93 481 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 RABGGTAQ92696 567 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 KAT5Q92993 513 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 NT5C1BQ96P26 610 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 TINF2Q9BSI4 451 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 MRPL4Q9BYD3 311 aaKnown RBP16.15■□□□□ 0.18
TPM3-205ENST00000328159 C2orf40Q9H1Z8 148 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 RNPEPQ9H4A4 650 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 RAB20Q9NX57 234 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 CPA4Q9UI42 421 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 ADGRA2Q96PE1 1338 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.15■□□□□ 0.18
TPM3-205ENST00000328159 CTAGE15A4D2H0 777 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 MSCO60682 206 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 H2AFZP0C0S5 128 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 CTAGE8P0CG41 777 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 ZNF157P51786 506 aaPredicted RBP16.15■□□□□ 0.18
TPM3-205ENST00000328159 MFAP3P55082 362 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 TFDP1Q14186 410 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 EFCAB12Q6NXP0 572 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 C15orf39Q6ZRI6 1047 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 H2AFVQ71UI9 128 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 CTAGE6Q86UF2 777 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 GLYCTKQ8IVS8 523 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 CTAGE4Q8IX94 777 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 PPM1KQ8N3J5 372 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 NPLOC4Q8TAT6 608 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 ZNF516Q92618 1163 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 KREMEN1Q96MU8 473 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 FNBP1Q96RU3 617 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.15■□□□□ 0.188e-7■■■■■ 194.6
TPM3-205ENST00000328159 INTUQ9ULD6 942 aa16.15■□□□□ 0.18
TPM3-205ENST00000328159 MANSC4A6NHS7 340 aaPredicted RBP16.14■□□□□ 0.17
TPM3-205ENST00000328159 SRGAP2O75044 1071 aa16.14■□□□□ 0.17
TPM3-205ENST00000328159 C22orf31O95567 290 aa16.14■□□□□ 0.17
TPM3-205ENST00000328159 PRKCBP05771 671 aa16.14■□□□□ 0.17
TPM3-205ENST00000328159 INSRRP14616 1297 aa16.14■□□□□ 0.17
TPM3-205ENST00000328159 TNFAIP3P21580 790 aa16.14■□□□□ 0.17
TPM3-205ENST00000328159 RHPN2Q8IUC4 686 aa16.14■□□□□ 0.17
TPM3-205ENST00000328159 HELQQ8TDG4 1101 aa16.14■□□□□ 0.17
TPM3-205ENST00000328159 AGPAT1Q99943 283 aa16.14■□□□□ 0.17
TPM3-205ENST00000328159 ABHD16BQ9H3Z7 469 aa16.14■□□□□ 0.17
TPM3-205ENST00000328159 PDE11AQ9HCR9 933 aa16.14■□□□□ 0.17
TPM3-205ENST00000328159 SLC5A4Q9NY91 659 aa16.14■□□□□ 0.17
TPM3-205ENST00000328159 RBAKQ9NYW8 714 aaPredicted RBP16.14■□□□□ 0.17
TPM3-205ENST00000328159 SNX12Q9UMY4 172 aa16.14■□□□□ 0.17
TPM3-205ENST00000328159 TTLL13PA6NNM8 815 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 IGF2BP3O00425 579 aaKnown RBP eCLIP16.13■□□□□ 0.171e-7■■■■□ 23.3
TPM3-205ENST00000328159 CLDN3O15551 220 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 ASAP2O43150 1006 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 PRLRP16471 622 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 SMPD1P17405 629 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 CLCN3P51790 818 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 WNT7BP56706 349 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 TUBB4BP68371 445 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 CKAP4Q07065 602 aaKnown RBP16.13■□□□□ 0.17
TPM3-205ENST00000328159 ACVR2BQ13705 512 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 MAPK6Q16659 721 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 DUSP28Q4G0W2 176 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 ZBTB41Q5SVQ8 909 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 FBXO38Q6PIJ6 1188 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 FAM71AQ8IYT1 594 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 METTL13Q8N6R0 699 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 GPR161Q8N6U8 529 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms