RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 TMEM161BQ8NDZ6 487 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 PWWP2AQ96N64 755 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 AS3MTQ9HBK9 375 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 LRRC4CQ9HCJ2 640 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 MLXIPLQ9NP71 852 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 BTBD7Q9P203 1132 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 SPDYE16A6NNV3 312 aaPredicted RBP11.47□□□□□ -0.57
CUL4A-201ENST00000326335 O00370 1275 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 WEE2P0C1S8 567 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 CTNNA1P35221 906 aaKnown RBP11.47□□□□□ -0.57
CUL4A-201ENST00000326335 CCT5P48643 541 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 CCDC38Q502W7 563 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 UBAP2Q5T6F2 1119 aaKnown RBP11.47□□□□□ -0.57
CUL4A-201ENST00000326335 TXLNBQ8N3L3 684 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 SLC7A3Q8WY07 619 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 ATP6V0A1Q93050 837 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 MAGOHBQ96A72 148 aaKnown RBP11.47□□□□□ -0.57
CUL4A-201ENST00000326335 NT5C1BQ96P26 610 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 MSTO1Q9BUK6 570 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 TMEM206Q9H813 350 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 ANAPC7Q9UJX3 599 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 PLAAQ9Y263 795 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 PFASO15067 1338 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 PSAPP07602 524 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 CD19P15391 556 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 GUCY2CP25092 1073 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 HMGB2P26583 209 aaKnown RBP11.47□□□□□ -0.57
CUL4A-201ENST00000326335 ASAP3Q8TDY4 903 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 DCPSQ96C86 337 aaKnown RBP11.47□□□□□ -0.57
CUL4A-201ENST00000326335 ZNF302Q9NR11 478 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 CYP26B1Q9NR63 512 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 PDGFCQ9NRA1 345 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 PCDHB4Q9Y5E5 795 aa11.47□□□□□ -0.57
CUL4A-201ENST00000326335 AGPSO00116 658 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 EIF3DO15371 548 aaKnown RBP eCLIP11.46□□□□□ -0.57
CUL4A-201ENST00000326335 CLDN3O15551 220 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 PIAS1O75925 651 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 PDE6CP51160 858 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 KRT76Q01546 638 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 NNTQ13423 1086 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 EMC2Q15006 297 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 Q3C1V9 767 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 GNPTABQ3T906 1256 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 RNF10Q8N5U6 811 aaKnown RBP11.46□□□□□ -0.57
CUL4A-201ENST00000326335 RNF149Q8NC42 400 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 INPP4AQ96PE3 977 aaPredicted RBP11.46□□□□□ -0.57
CUL4A-201ENST00000326335 XPNPEP1Q9NQW7 623 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 GOLGA8SH3BPF8 625 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 SLC16A3O15427 465 aaKnown RBP11.46□□□□□ -0.57
CUL4A-201ENST00000326335 LMNB1P20700 586 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 FGFR4P22455 802 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 CLCN3P51790 818 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 SEC24CP53992 1094 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 HSDL1Q3SXM5 330 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 SLC39A4Q6P5W5 647 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 KLRG1Q96E93 195 aa11.46□□□□□ -0.57
CUL4A-201ENST00000326335 CNOT8Q9UFF9 292 aaKnown RBP11.46□□□□□ -0.57
CUL4A-201ENST00000326335 PJA2O43164 708 aa11.46□□□□□ -0.58
CUL4A-201ENST00000326335 DYNLT1P63172 113 aa11.46□□□□□ -0.58
CUL4A-201ENST00000326335 STXBP2Q15833 593 aa11.46□□□□□ -0.58
CUL4A-201ENST00000326335 C1orf220Q5T0J3 134 aa11.46□□□□□ -0.58
CUL4A-201ENST00000326335 WDR93Q6P2C0 686 aa11.46□□□□□ -0.58
CUL4A-201ENST00000326335 OR5B17Q8NGF7 314 aa11.46□□□□□ -0.58
CUL4A-201ENST00000326335 MGARPQ8TDB4 240 aa11.46□□□□□ -0.58
CUL4A-201ENST00000326335 GPR88Q9GZN0 384 aa11.46□□□□□ -0.58
CUL4A-201ENST00000326335 MTFR1LQ9H019 292 aa11.46□□□□□ -0.58
CUL4A-201ENST00000326335 C10orf88Q9H8K7 445 aa11.46□□□□□ -0.58
CUL4A-201ENST00000326335 C1orf112Q9NSG2 853 aa11.46□□□□□ -0.58
CUL4A-201ENST00000326335 RAB20Q9NX57 234 aa11.46□□□□□ -0.58
CUL4A-201ENST00000326335 FBXL5Q9UKA1 691 aa11.46□□□□□ -0.58
CUL4A-201ENST00000326335 LTBP1Q14766 1721 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 DSG3P32926 999 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 TCF7P36402 384 aaPredicted RBP11.45□□□□□ -0.58
CUL4A-201ENST00000326335 PAK2Q13177 524 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 IFI16Q16666 785 aaKnown RBP11.45□□□□□ -0.58
CUL4A-201ENST00000326335 KRT39Q6A163 491 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 NT5DC3Q86UY8 548 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 PARD3BQ8TEW8 1205 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 RNF25Q96BH1 459 aaPredicted RBP11.45□□□□□ -0.58
CUL4A-201ENST00000326335 BORCS6Q96GS4 357 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 ATP6V0A4Q9HBG4 840 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 RBAKQ9NYW8 714 aaPredicted RBP11.45□□□□□ -0.58
CUL4A-201ENST00000326335 SEL1LQ9UBV2 794 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 BZW2Q9Y6E2 419 aaKnown RBP11.45□□□□□ -0.58
CUL4A-201ENST00000326335 POLR2AP24928 1970 aaKnown RBP11.45□□□□□ -0.58
CUL4A-201ENST00000326335 PTPRJQ12913 1337 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 CCDC66A2RUB6 948 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 TBC1D12O60347 775 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 ATF7P17544 494 aaPredicted RBP11.45□□□□□ -0.58
CUL4A-201ENST00000326335 EPHB4P54760 987 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 MARSP56192 900 aaKnown RBP11.45□□□□□ -0.58
CUL4A-201ENST00000326335 PPP1R7Q15435 360 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 KRT71Q3SY84 523 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 CHADLQ6NUI6 762 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 FBXL13Q8NEE6 735 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 ZNF564Q8TBZ8 553 aaPredicted RBP11.45□□□□□ -0.58
CUL4A-201ENST00000326335 FAM71BQ8TC56 605 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 RFFLQ8WZ73 363 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 CYFIP2Q96F07 1278 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 FHDC1Q9C0D6 1143 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms