RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 SPRED3Q2MJR0 410 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 TAOK1Q7L7X3 1001 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 ZC3H3Q8IXZ2 948 aaKnown RBP13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 ATP8B4Q8TF62 1192 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 KIFAP3Q92845 792 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 PWWP2AQ96N64 755 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 FNBP1Q96RU3 617 aa13.83□□□□□ -0.2
HMGCS1-201ENST00000325110 ANKRD63C9JTQ0 380 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 RTN2O75298 545 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 P4HBP07237 508 aaKnown RBP13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 QARSP47897 775 aaKnown RBP13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 TTC27Q6P3X3 843 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 ARHGEF2Q92974 986 aaKnown RBP13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 PCDHB18PQ96TA0 734 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 OSBPL7Q9BZF2 842 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 PARP2Q9UGN5 583 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 ITGB5P18084 799 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 YWHABP31946 246 aaKnown RBP13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 SNRNP35Q16560 246 aaKnown RBP13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 KYNUQ16719 465 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 DUPD1Q68J44 220 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 TATDN1Q6P1N9 297 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 SEPT14Q6ZU15 432 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 CCDC63Q8NA47 563 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 TAS1R2Q8TE23 839 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 IDI2Q9BXS1 227 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 TMEM117Q9H0C3 514 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 STMN4Q9H169 189 aaPredicted RBP13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 KMT5AQ9NQR1 393 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 DNM1LO00429 736 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 CPP00450 1065 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 RARAP10276 462 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 ATF7P17544 494 aaPredicted RBP13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 PPATQ06203 517 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 DMP1Q13316 513 aaPredicted RBP13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 MTM1Q13496 603 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 DPY19L2P1Q6NXN4 242 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 KRT27Q7Z3Y8 459 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 SLC13A5Q86YT5 568 aaPredicted RBP13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 SLC5A5Q92911 643 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 HAUS1Q96CS2 278 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 CEP170P1Q96L14 293 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 MXRA8Q9BRK3 442 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 FAM213AQ9BRX8 229 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 TRIM7Q9C029 511 aa13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 PPP1R1BQ9UD71 204 aaPredicted RBP13.82□□□□□ -0.2
HMGCS1-201ENST00000325110 MAST2Q6P0Q8 1798 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 PODXLO00592 558 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 IFNB1P01574 187 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 SCTRP47872 440 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 ADCY2Q08462 1091 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 C6orf118Q5T5N4 469 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 FAM47EQ6ZV65 393 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 CNPY4Q8N129 248 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 DAW1Q8N136 415 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 C9orf72Q96LT7 481 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 TACO1Q9BSH4 297 aaKnown RBP13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 CTNNAL1Q9UBT7 734 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 FSBPO95073 299 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 EZRP15311 586 aaKnown RBP13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 STX2P32856 288 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 COILP38432 576 aaPredicted RBP13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 PPP2R5CQ13362 524 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 SRRM1Q8IYB3 904 aaKnown RBP13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 PRPF38AQ8NAV1 312 aaKnown RBP13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 EPS8L1Q8TE68 723 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 CRYGNQ8WXF5 182 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 C11orf70Q9BRQ4 267 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 HOMER3Q9NSC5 361 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 FGFR1OP2Q9NVK5 253 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 TRPC5Q9UL62 973 aaPredicted RBP13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 TTC7AQ9ULT0 858 aaPredicted RBP13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 DIS3Q9Y2L1 958 aaKnown RBP13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 SLC26A4O43511 780 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 GAS8O95995 478 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 ADRB2P07550 413 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 ATF2P15336 505 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 VCAM1P19320 739 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 GBP2P32456 591 aaPredicted RBP13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 TATDN2Q93075 761 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 ACTR5Q9H9F9 607 aaPredicted RBP13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 C1orf112Q9NSG2 853 aa13.81□□□□□ -0.2
HMGCS1-201ENST00000325110 NCANO14594 1321 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 TCP11X1B4DZS4 312 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 PPFIA2O75334 1257 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 ECM2O94769 699 aaPredicted RBP13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 CYP3A4P08684 503 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 RARRES1P49788 294 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 ANKRD20A8PQ5CZ79 823 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 KRT39Q6A163 491 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 CYB5D1Q6P9G0 228 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 CYFIP1Q7L576 1253 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 PRUNE1Q86TP1 453 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 BORCS6Q96GS4 357 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 ANKFY1Q9P2R3 1169 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 SERPINA10Q9UK55 444 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 SMCHD1A6NHR9 2005 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 LOC102724159A0A0B4J2E5 919 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 POC1B-GALNT4F8VUJ3 575 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 PI4K2BG5E9Z4 385 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms