RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 EMILIN3Q9NT22 766 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 TMOD4Q9NZQ9 345 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 STX18Q9P2W9 335 aaKnown RBP8.35□□□□□ -1.07
CD46-201ENST00000322875 ALG6Q9Y672 507 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 NHSQ6T4R5 1651 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 TCRBV7S2A1N4TA0A589 114 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 TSPY2A6NKD2 308 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 CETN3O15182 167 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 TBX10O75333 385 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 CBX6O95503 412 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 SMARCA1P28370 1054 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 GNA11P29992 359 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 MARCKSL1P49006 195 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 MCL1Q07820 350 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 CTTNQ14247 550 aaKnown RBP8.35□□□□□ -1.07
CD46-201ENST00000322875 LMOD2Q6P5Q4 547 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 GJB7Q6PEY0 223 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 BICDL1Q6ZP65 573 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 LCA5Q86VQ0 697 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 GLYCTKQ8IVS8 523 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 DNAJC10Q8IXB1 793 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 NSUN4Q96CB9 384 aaKnown RBP8.35□□□□□ -1.07
CD46-201ENST00000322875 THAP2Q9H0W7 228 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 C6orf50Q9HD87 102 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 KCNK9Q9NPC2 374 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 NAALADL1Q9UQQ1 740 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 ZNF510Q9Y2H8 683 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 ERVV-1B6SEH8 477 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 C2CD2LO14523 706 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 PRPF4O43172 522 aaKnown RBP eCLIP8.35□□□□□ -1.07
CD46-201ENST00000322875 MTA2O94776 668 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 LYNP07948 512 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 KRT13P13646 458 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 NR2F2P24468 414 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 SOX5P35711 763 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 INHBCP55103 352 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 PRPF4BQ13523 1007 aaKnown RBP8.35□□□□□ -1.07
CD46-201ENST00000322875 HAS1Q92839 578 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 CDK5RAP3Q96JB5 506 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 KANSL3Q9P2N6 904 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 ZNF212Q9UDV6 495 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 BLOC1S6Q9UL45 172 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 ZBTB12Q9Y330 459 aaPredicted RBP8.35□□□□□ -1.07
CD46-201ENST00000322875 COMMD3-BMI1R4GMX3 469 aa8.35□□□□□ -1.07
CD46-201ENST00000322875 TNRC6CQ9HCJ0 1690 aaKnown RBP8.35□□□□□ -1.07
CD46-201ENST00000322875 ANKRD62A6NC57 917 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 AKAP3O75969 853 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 PSMG1O95456 288 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 TDP2O95551 362 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 ACSL3O95573 720 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 GCAP28676 217 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 CASP5P51878 434 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 NAPAP54920 295 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 IL9RQ01113 521 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 TFAP4Q01664 338 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 RCN1Q15293 331 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 PDK4Q16654 411 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 CERKLQ49MI3 558 aaPredicted RBP8.34□□□□□ -1.07
CD46-201ENST00000322875 ARSHQ5FYA8 562 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 MEX3CQ5U5Q3 659 aaKnown RBP8.34□□□□□ -1.07
CD46-201ENST00000322875 KRT79Q5XKE5 535 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 ZNF398Q8TD17 642 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 TAOK3Q9H2K8 898 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 TAS2R14Q9NYV8 317 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 HSFX1Q9UBD0 423 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 PASKQ96RG2 1323 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 FAM47DPA6NHR8 397 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 HGSO14964 777 aaPredicted RBP8.34□□□□□ -1.07
CD46-201ENST00000322875 SLC16A3O15427 465 aaKnown RBP8.34□□□□□ -1.07
CD46-201ENST00000322875 SLC26A4O43511 780 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 KRT36O76013 467 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 SPATA31D3P0C874 917 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 ITGB4P16144 1822 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 CYP11B2P19099 503 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 ITIH2P19823 946 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 STAT1P42224 750 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 EPS15P42566 896 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 SERPINB4P48594 390 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 CHRNDQ07001 517 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 BMT2Q1RMZ1 405 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 TMEM266Q2M3C6 531 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 TAF1BQ53T94 588 aaPredicted RBP8.34□□□□□ -1.07
CD46-201ENST00000322875 SEPT14Q6ZU15 432 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 SPATA31D4Q6ZUB0 917 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 FAM47EQ6ZV65 393 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 CLNKQ7Z7G1 428 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 CCDC65Q8IXS2 484 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 CTNNBL1Q8WYA6 563 aaPredicted RBP8.34□□□□□ -1.07
CD46-201ENST00000322875 SPOCK2Q92563 424 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 ZNF184Q99676 751 aaPredicted RBP8.34□□□□□ -1.07
CD46-201ENST00000322875 STK33Q9BYT3 514 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 MMADHCQ9H3L0 296 aaPredicted RBP8.34□□□□□ -1.07
CD46-201ENST00000322875 PREBQ9HCU5 417 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 TMEM260Q9NX78 707 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 NINJ2Q9NZG7 142 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 ABCF2Q9UG63 623 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 NEU2Q9Y3R4 380 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 TAF1LQ8IZX4 1826 aa8.34□□□□□ -1.07
CD46-201ENST00000322875 DDX60LQ5H9U9 1706 aaKnown RBP8.34□□□□□ -1.07
CD46-201ENST00000322875 UMODL1Q5DID0 1318 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms