RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 RGS16O15492 202 aaPredicted RBP9.36□□□□□ -0.91
CLK1-201ENST00000321356 DHX15O43143 795 aaKnown RBP9.36□□□□□ -0.91
CLK1-201ENST00000321356 LYPLA2O95372 231 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 P4HBP07237 508 aaKnown RBP9.36□□□□□ -0.91
CLK1-201ENST00000321356 PLS3P13797 630 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 SCTRP47872 440 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 RARRES1P49788 294 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 MXI1P50539 228 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 GSCP56915 257 aaPredicted RBP9.36□□□□□ -0.91
CLK1-201ENST00000321356 IFI35P80217 286 aaPredicted RBP9.36□□□□□ -0.91
CLK1-201ENST00000321356 FMO1Q01740 532 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 XRCC4Q13426 336 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 MESDQ14696 234 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 ZNF746Q6NUN9 644 aaPredicted RBP9.36□□□□□ -0.91
CLK1-201ENST00000321356 NIPA1Q7RTP0 329 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 FUKQ8N0W3 1084 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 JPH2Q9BR39 696 aaPredicted RBP9.36□□□□□ -0.91
CLK1-201ENST00000321356 TMEM117Q9H0C3 514 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 AZI2Q9H6S1 392 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.36□□□□□ -0.91
CLK1-201ENST00000321356 GTF3C4Q9UKN8 822 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 MTUS1Q9ULD2 1270 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 ZBTB21Q9ULJ3 1066 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 BCS1LQ9Y276 419 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 ZHX2Q9Y6X8 837 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 PASKQ96RG2 1323 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 FAM170AA1A519 330 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 TMEM110-MUSTN1A8MSY1 372 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 ANKRD63C9JTQ0 380 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 TP73O15350 636 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 ATMINO43313 823 aaPredicted RBP9.35□□□□□ -0.91
CLK1-201ENST00000321356 DNAJC8O75937 253 aaPredicted RBP9.35□□□□□ -0.91
CLK1-201ENST00000321356 ADRB2P07550 413 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 RARAP10276 462 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 HMGB2P26583 209 aaKnown RBP9.35□□□□□ -0.91
CLK1-201ENST00000321356 ITIH4Q14624 930 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 RASA3Q14644 834 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 MIER3Q7Z3K6 550 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 CCDC91Q7Z6B0 441 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 FAM160B2Q86V87 743 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 LDHDQ86WU2 507 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 CCDC197Q8NCU1 140 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 ZSWIM2Q8NEG5 633 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 ZNF564Q8TBZ8 553 aaPredicted RBP9.35□□□□□ -0.91
CLK1-201ENST00000321356 PSPC1Q8WXF1 523 aaKnown RBP9.35□□□□□ -0.91
CLK1-201ENST00000321356 HVCN1Q96D96 273 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 SGSM3Q96HU1 749 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 NCAPGQ9BPX3 1015 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 TIPINQ9BVW5 301 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 STMN4Q9H169 189 aaPredicted RBP9.35□□□□□ -0.91
CLK1-201ENST00000321356 LRRC19Q9H756 370 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 KCNH7Q9NS40 1196 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 UVRAGQ9P2Y5 699 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 COQ4Q9Y3A0 265 aa9.35□□□□□ -0.91
CLK1-201ENST00000321356 AFF2P51816 1311 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 CCT8L1PA6NM43 557 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 FSCN2O14926 492 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 CYP26A1O43174 497 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 PPIP5K2O43314 1243 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 FGFR4P22455 802 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 NCKAP1LP55160 1127 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 GHRHRQ02643 423 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 AUHQ13825 339 aaKnown RBP9.34□□□□□ -0.91
CLK1-201ENST00000321356 GRIPAP1Q4V328 841 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 CHADLQ6NUI6 762 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 CYB5D1Q6P9G0 228 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 TRMT10CQ7L0Y3 403 aaKnown RBP9.34□□□□□ -0.91
CLK1-201ENST00000321356 HAUS6Q7Z4H7 955 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 SLC47A2Q86VL8 602 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 CPNE8Q86YQ8 564 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 MAGEC3Q8TD91 643 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 EPS8L3Q8TE67 593 aaKnown RBP9.34□□□□□ -0.91
CLK1-201ENST00000321356 DDX1Q92499 740 aaKnown RBP9.34□□□□□ -0.91
CLK1-201ENST00000321356 ZKSCAN4Q969J2 545 aaPredicted RBP9.34□□□□□ -0.91
CLK1-201ENST00000321356 SELENOSQ9BQE4 189 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 NUP85Q9BW27 656 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 ROPN1BQ9BZX4 212 aaPredicted RBP9.34□□□□□ -0.91
CLK1-201ENST00000321356 TAOK3Q9H2K8 898 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 ROPN1Q9HAT0 212 aaPredicted RBP9.34□□□□□ -0.91
CLK1-201ENST00000321356 INTS9Q9NV88 658 aaKnown RBP9.34□□□□□ -0.91
CLK1-201ENST00000321356 CHORDC1Q9UHD1 332 aaPredicted RBP9.34□□□□□ -0.91
CLK1-201ENST00000321356 BRWD3Q6RI45 1802 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 TLDC2A0PJX2 215 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 RASGRF2O14827 1237 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 SPOPO43791 374 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 GRIN3BO60391 1043 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 ECEL1O95672 775 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 GSTA1P08263 222 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 MMP10P09238 476 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 CYP11B1P15538 503 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 QARSP47897 775 aaKnown RBP9.34□□□□□ -0.91
CLK1-201ENST00000321356 GPC3P51654 580 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 MFAP3P55082 362 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 RWDD2BP57060 319 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 CDR2Q01850 454 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 SPP2Q13103 211 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 STYK1Q6J9G0 422 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 RHBDF2Q6PJF5 856 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 MIGA2Q7L4E1 593 aa9.34□□□□□ -0.91
CLK1-201ENST00000321356 MAEAQ7L5Y9 396 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms