RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 TRIM66O15016 1216 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 WEE1P30291 646 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 TBCCQ15814 346 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 FUT11Q495W5 492 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 METTL16Q86W50 562 aaKnown RBP9.37□□□□□ -0.91
SSBP2-201ENST00000320672 XXYLT1Q8NBI6 393 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 SHANK2Q9UPX8 1470 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 ADAMTS12P58397 1594 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 FAM47DPA6NHR8 397 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 NCF1BA6NI72 391 aaPredicted RBP9.37□□□□□ -0.91
SSBP2-201ENST00000320672 NCF1CA8MVU1 366 aaPredicted RBP9.37□□□□□ -0.91
SSBP2-201ENST00000320672 NCF1P14598 390 aaPredicted RBP9.37□□□□□ -0.91
SSBP2-201ENST00000320672 CCDC137Q6PK04 289 aaKnown RBP9.37□□□□□ -0.91
SSBP2-201ENST00000320672 TGS1Q96RS0 853 aaKnown RBP9.37□□□□□ -0.91
SSBP2-201ENST00000320672 NOC2LQ9Y3T9 749 aaKnown RBP9.37□□□□□ -0.91
SSBP2-201ENST00000320672 MBD5Q9P267 1494 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 RPS6KA4O75676 772 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 CIITAP33076 1130 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 FXR1P51114 621 aaKnown RBP eCLIP9.37□□□□□ -0.91
SSBP2-201ENST00000320672 OR6J1Q8NGC5 347 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 FBXO41Q8TF61 875 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 DACH2Q96NX9 599 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 RAD18Q9NS91 495 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 A8MX80 341 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 SP100P23497 879 aaPredicted RBP9.37□□□□□ -0.91
SSBP2-201ENST00000320672 BBOF1Q8ND07 529 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 CHMP2BQ9UQN3 213 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 EPB42P16452 691 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 SLC10A5Q5PT55 438 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 DEFB132Q7Z7B7 95 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 PABPC5Q96DU9 382 aaKnown RBP9.37□□□□□ -0.91
SSBP2-201ENST00000320672 NPHS2Q9NP85 383 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 RSPH10B2B2RC85 870 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 RSPH10BP0C881 870 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 SEC24CP53992 1094 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 RCSD1Q6JBY9 416 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 CRLF3Q8IUI8 442 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 SLC9A2Q9UBY0 812 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 C6orf222P0C671 652 aaPredicted RBP9.37□□□□□ -0.91
SSBP2-201ENST00000320672 PBLDP30039 288 aaPredicted RBP9.37□□□□□ -0.91
SSBP2-201ENST00000320672 CDC25BP30305 580 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 ATN1P54259 1190 aaPredicted RBP9.37□□□□□ -0.91
SSBP2-201ENST00000320672 MCEEQ96PE7 176 aa9.37□□□□□ -0.91
SSBP2-201ENST00000320672 PRG3Q9Y2Y8 225 aaPredicted RBP9.37□□□□□ -0.91
SSBP2-201ENST00000320672 BRD2P25440 801 aaKnown RBP9.36□□□□□ -0.91
SSBP2-201ENST00000320672 ANKRD20A4Q4UJ75 823 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 ANKRD20A8PQ5CZ79 823 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 KCNT1Q5JUK3 1230 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 SPDYAQ5MJ70 313 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 ANKRD20A2Q5SQ80 823 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 ANKRD20A1Q5TYW2 823 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 MMS22LQ6ZRQ5 1243 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 ARMCX2Q7L311 632 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 PBKQ96KB5 322 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 AGO2Q9UKV8 859 aaKnown RBP9.36□□□□□ -0.91
SSBP2-201ENST00000320672 PNMA2Q9UL42 364 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 CHRNA3P32297 505 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 ATG16L1Q676U5 607 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 AK8Q96MA6 479 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 APOL2Q9BQE5 337 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 SLC7A5P2Q9GIP4 190 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 C10orf88Q9H8K7 445 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 L3MBTL1Q9Y468 752 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 PHLPP2Q6ZVD8 1323 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 RNF103-CHMP3A0A140T963 221 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 LGALS16A8MUM7 142 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 ZBTB39O15060 712 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 PFDN6O15212 129 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 SMNDC1O75940 238 aaKnown RBP eCLIP9.36□□□□□ -0.91
SSBP2-201ENST00000320672 HAUS6Q7Z4H7 955 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 IFNLR1Q8IU57 520 aaPredicted RBP9.36□□□□□ -0.91
SSBP2-201ENST00000320672 TAAR1Q96RJ0 339 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 SCP2P22307 547 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 TSPY1Q01534 308 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 STK4Q13043 487 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 MGAT5BQ3V5L5 792 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 PCMTD2Q9NV79 361 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 ENO3P13929 434 aaPredicted RBP9.36□□□□□ -0.91
SSBP2-201ENST00000320672 ANGEL2Q5VTE6 544 aaKnown RBP9.36□□□□□ -0.91
SSBP2-201ENST00000320672 CROCCP2Q86T23 111 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 C1orf131Q8NDD1 294 aaKnown RBP9.36□□□□□ -0.91
SSBP2-201ENST00000320672 B4GALNT2Q8NHY0 566 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 OSBPL1AQ9BXW6 950 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 TIMM13Q9Y5L4 95 aaPredicted RBP9.36□□□□□ -0.91
SSBP2-201ENST00000320672 PPP3CCP48454 512 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 EIF3EP60228 445 aaKnown RBP9.36□□□□□ -0.91
SSBP2-201ENST00000320672 EMID1Q96A84 441 aaPredicted RBP9.36□□□□□ -0.91
SSBP2-201ENST00000320672 OSBPL3Q9H4L5 887 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 SLC13A4Q9UKG4 626 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 DUSP10Q9Y6W6 482 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 TPST1O60507 370 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 TJP3O95049 919 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 SDC4P31431 198 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 COPS2P61201 443 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 ATG4AQ8WYN0 398 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 ELMO2Q96JJ3 720 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 GCNAQ96QF7 691 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 REEP2Q9BRK0 252 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 TRIM55Q9BYV6 548 aa9.36□□□□□ -0.91
SSBP2-201ENST00000320672 ETNK1Q9HBU6 452 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms