RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ZNF569Q5MCW4 686 aa14.12□□□□□ -0.15
CPNE1-201ENST00000317677 CEP85LQ5SZL2 805 aa14.12□□□□□ -0.15
CPNE1-201ENST00000317677 TCERG1LQ5VWI1 586 aa14.12□□□□□ -0.15
CPNE1-201ENST00000317677 SPRYD7Q5W111 196 aa14.12□□□□□ -0.15
CPNE1-201ENST00000317677 SLC39A4Q6P5W5 647 aa14.12□□□□□ -0.15
CPNE1-201ENST00000317677 TAS1R3Q7RTX0 852 aa14.12□□□□□ -0.15
CPNE1-201ENST00000317677 FBXO16Q8IX29 292 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-201ENST00000317677 NOA1Q8NC60 698 aaKnown RBP14.12□□□□□ -0.15
CPNE1-201ENST00000317677 PLEKHO2Q8TD55 490 aa14.12□□□□□ -0.15
CPNE1-201ENST00000317677 TMEM174Q8WUU8 243 aa14.12□□□□□ -0.15
CPNE1-201ENST00000317677 SPATS2LQ9NUQ6 558 aaKnown RBP14.12□□□□□ -0.15
CPNE1-201ENST00000317677 TTC36A6NLP5 189 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 DGAT1O75907 488 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 TRIM49P0CI25 452 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 TRIM49CP0CI26 452 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 EZRP15311 586 aaKnown RBP14.11□□□□□ -0.15
CPNE1-201ENST00000317677 ADSSP30520 456 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 TM4SF4P48230 202 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 GNGT1P63211 74 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 CYP27A1Q02318 531 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 MYBPC2Q14324 1141 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 TSR1Q2NL82 804 aaKnown RBP14.11□□□□□ -0.15
CPNE1-201ENST00000317677 CBWD6Q4V339 395 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 CBWD3Q5JTY5 395 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 CBWD5Q5RIA9 395 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 C1orf220Q5T0J3 134 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 WDR78Q5VTH9 848 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 AP1ARQ63HQ0 302 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 CCDC62Q6P9F0 684 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 MAP4K3Q8IVH8 894 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 CCDC170Q8IYT3 715 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 ANKRD13CQ8N6S4 541 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 SPIRE2Q8WWL2 714 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 KIFAP3Q92845 792 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 PTPN18Q99952 460 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 NTPCRQ9BSD7 190 aaKnown RBP14.11□□□□□ -0.15
CPNE1-201ENST00000317677 TMEM206Q9H813 350 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 PLCB1Q9NQ66 1216 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 TBX20Q9UMR3 447 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 MANSC4A6NHS7 340 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-201ENST00000317677 CCDC169A6NNP5 214 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 CAPN15O75808 1086 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 CETPP11597 493 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 EIF4A3P38919 411 aaKnown RBP14.11□□□□□ -0.15
CPNE1-201ENST00000317677 DLG4P78352 724 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 EMC2Q15006 297 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 TARBP2Q15633 366 aaKnown RBP14.11□□□□□ -0.15
CPNE1-201ENST00000317677 EXOC3L4Q17RC7 722 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 KLHDC7AQ5VTJ3 777 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 TTC19Q6DKK2 380 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-201ENST00000317677 GJB7Q6PEY0 223 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 METTL7BQ6UX53 244 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 CACNA2D4Q7Z3S7 1137 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 TAX1BP1Q86VP1 789 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 RDH13Q8NBN7 331 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 CCDC26Q8TAB7 109 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 RUBCNQ92622 972 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 COPS5Q92905 334 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 LACRTQ9GZZ8 138 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 POLR3FQ9H1D9 316 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-201ENST00000317677 PDGFCQ9NRA1 345 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 HOMER3Q9NSC5 361 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 ZNHIT6Q9NWK9 470 aaKnown RBP14.11□□□□□ -0.15
CPNE1-201ENST00000317677 DDX20Q9UHI6 824 aaKnown RBP14.11□□□□□ -0.15
CPNE1-201ENST00000317677 PNMA3Q9UL41 463 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 MYO6Q9UM54 1294 aa14.11□□□□□ -0.15
CPNE1-201ENST00000317677 DENND3A2RUS2 1198 aa14.1□□□□□ -0.15
CPNE1-201ENST00000317677 EXOC3O60645 756 aa14.1□□□□□ -0.15
CPNE1-201ENST00000317677 ADRB2P07550 413 aa14.1□□□□□ -0.15
CPNE1-201ENST00000317677 TGFB3P10600 412 aa14.1□□□□□ -0.15
CPNE1-201ENST00000317677 SLC8A1P32418 973 aa14.1□□□□□ -0.15
CPNE1-201ENST00000317677 TCF7P36402 384 aaPredicted RBP14.1□□□□□ -0.15
CPNE1-201ENST00000317677 CCNHP51946 323 aaPredicted RBP14.1□□□□□ -0.15
CPNE1-201ENST00000317677 GTF2A2P52657 109 aa14.1□□□□□ -0.15
CPNE1-201ENST00000317677 CLNS1AP54105 237 aaKnown RBP14.1□□□□□ -0.15
CPNE1-201ENST00000317677 RTP1P59025 263 aa14.1□□□□□ -0.15
CPNE1-201ENST00000317677 SKIDA1Q1XH10 827 aa14.1□□□□□ -0.15
CPNE1-201ENST00000317677 HSDL1Q3SXM5 330 aa14.1□□□□□ -0.15
CPNE1-201ENST00000317677 CCNI2Q6ZMN8 369 aaPredicted RBP14.1□□□□□ -0.15
CPNE1-201ENST00000317677 MCPH1Q8NEM0 835 aa14.1□□□□□ -0.15
CPNE1-201ENST00000317677 ASAP3Q8TDY4 903 aa14.1□□□□□ -0.15
CPNE1-201ENST00000317677 CALR3Q96L12 384 aaKnown RBP14.1□□□□□ -0.15
CPNE1-201ENST00000317677 NIFKQ9BYG3 293 aaKnown RBP14.1□□□□□ -0.15
CPNE1-201ENST00000317677 DHX33Q9H6R0 707 aaKnown RBP14.1□□□□□ -0.15
CPNE1-201ENST00000317677 ACTR5Q9H9F9 607 aaPredicted RBP14.1□□□□□ -0.15
CPNE1-201ENST00000317677 KMT5AQ9NQR1 393 aa14.1□□□□□ -0.15
CPNE1-201ENST00000317677 HSPBP1Q9NZL4 362 aa14.1□□□□□ -0.15
CPNE1-201ENST00000317677 SLC45A1Q9Y2W3 748 aa14.1□□□□□ -0.15
CPNE1-201ENST00000317677 GOLGA6BA6NDN3 693 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 NDUFAB1O14561 156 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 OPA1O60313 960 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 LCA5LO95447 670 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 ALDH1A1P00352 501 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 UCHL3P15374 230 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 CYLC1P35663 651 aaPredicted RBP14.09□□□□□ -0.15
CPNE1-201ENST00000317677 FMO5P49326 533 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 KIF11P52732 1056 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 BFSP1Q12934 665 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 DMP1Q13316 513 aaPredicted RBP14.09□□□□□ -0.15
CPNE1-201ENST00000317677 SNCBQ16143 134 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms