RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 TTLL4Q14679 1199 aa7.59□□□□□ -1.19
LYSMD3-201ENST00000315948 TDRD10Q5VZ19 366 aaKnown RBP7.59□□□□□ -1.19
LYSMD3-201ENST00000315948 STXBP4Q6ZWJ1 553 aa7.59□□□□□ -1.19
LYSMD3-201ENST00000315948 SLC9A9Q8IVB4 645 aa7.59□□□□□ -1.19
LYSMD3-201ENST00000315948 SLC30A5Q8TAD4 765 aa7.59□□□□□ -1.19
LYSMD3-201ENST00000315948 PCDHB18PQ96TA0 734 aa7.59□□□□□ -1.19
LYSMD3-201ENST00000315948 C16orf70Q9BSU1 422 aa7.59□□□□□ -1.19
LYSMD3-201ENST00000315948 ZNF446Q9NWS9 450 aa7.59□□□□□ -1.19
LYSMD3-201ENST00000315948 SUCLA2Q9P2R7 463 aaPredicted RBP7.59□□□□□ -1.19
LYSMD3-201ENST00000315948 NAGPAQ9UK23 515 aa7.59□□□□□ -1.19
LYSMD3-201ENST00000315948 C5orf42Q9H799 3197 aa7.59□□□□□ -1.2
LYSMD3-201ENST00000315948 A0A087WZ62 844 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 MYADML2A6NDP7 307 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 MSCO60682 206 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 CST3P01034 146 aaPredicted RBP7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 CRHR2Q13324 411 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 SLC18A3Q16572 532 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 CYP4F22Q6NT55 531 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 CCDC170Q8IYT3 715 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 MNS1Q8NEH6 495 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 ATP8B4Q8TF62 1192 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 SCFD2Q8WU76 684 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 SPIRE2Q8WWL2 714 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 SECISBP2LQ93073 1101 aaKnown RBP7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 BTBD6Q96KE9 485 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 PNKPQ96T60 521 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 NAPGQ99747 312 aaPredicted RBP7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 FDXACB1Q9BRP7 624 aaPredicted RBP7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 MSTO1Q9BUK6 570 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 APOBEC3GQ9HC16 384 aaKnown RBP7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 AGO2Q9UKV8 859 aaKnown RBP7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 PNMA3Q9UL41 463 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 VNN1O95497 513 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 TGFB3P10600 412 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 KIZQ2M2Z5 673 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 ZNF394Q53GI3 561 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 ALKBH5Q6P6C2 394 aaKnown RBP7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 INTS8Q75QN2 995 aaKnown RBP7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 NOP9Q86U38 636 aaKnown RBP7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 GSPT2Q8IYD1 628 aaKnown RBP7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 EHBP1Q8NDI1 1231 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 ANKRD7Q92527 254 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 TINF2Q9BSI4 451 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 CCP110O43303 1012 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 AOC2O75106 756 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 IPO7O95373 1038 aaKnown RBP7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 SOX5P35711 763 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 KRT83P78385 493 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 PRPF4BQ13523 1007 aaKnown RBP7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 GRB14Q14449 540 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 ANKRD23Q86SG2 305 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 GPD1LQ8N335 351 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 HDAC7Q8WUI4 952 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 MKNK1Q9BUB5 465 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 MTMR12Q9C0I1 747 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 ST6GALNAC4Q9H4F1 302 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 IFT122Q9HBG6 1241 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 ABT1Q9ULW3 272 aaKnown RBP7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 HES2Q9Y543 173 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 KRT86O43790 486 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 ADCY3O60266 1144 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 C22orf31O95567 290 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 MMEP08473 750 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 TERF1P54274 439 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 C2orf54Q08AI8 447 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 BIRC3Q13489 604 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 ACVR2BQ13705 512 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 MARCH8Q5T0T0 291 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 PLEKHH3Q7Z736 793 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 PASD1Q8IV76 773 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 HELQQ8TDG4 1101 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 OSBPL7Q9BZF2 842 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 TRIM7Q9C029 511 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 THAP2Q9H0W7 228 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 ST7Q9NRC1 585 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 NRBP2Q9NSY0 501 aa7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 RBAKQ9NYW8 714 aaPredicted RBP7.58□□□□□ -1.2
LYSMD3-201ENST00000315948 FAM189A1O60320 539 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 GJB6O95452 261 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 IBSPP21815 317 aaPredicted RBP7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 CDK17Q00537 523 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 STRN3Q13033 797 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 MAPK8IP2Q13387 824 aaPredicted RBP7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 AADACL2Q6P093 401 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 SCARA5Q6ZMJ2 495 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 KCTD17Q8N5Z5 321 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 AFAP1L1Q8TED9 768 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 TLR10Q9BXR5 811 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 MYO6Q9UM54 1294 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 COG5Q9UP83 839 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 AKT3Q9Y243 479 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 UBE4BO95155 1302 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 GRID2IPA4D2P6 1211 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 H3BRB1 525 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 LCA5LO95447 670 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 NFIL3Q16649 462 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 BRDTQ58F21 947 aaPredicted RBP7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 FAM182AQ5T1J6 154 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 FAM160B1Q5W0V3 765 aa7.57□□□□□ -1.2
LYSMD3-201ENST00000315948 TRAPPC11Q7Z392 1133 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms