RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 DDX42Q86XP3 938 aaKnown RBP eCLIP8.5□□□□□ -1.05
CNOT4-201ENST00000315544 DOCK3Q8IZD9 2030 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 CYP4X1Q8N118 509 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 CUL5Q93034 780 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 PCYT2Q99447 389 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 AGO4Q9HCK5 861 aaKnown RBP8.5□□□□□ -1.05
CNOT4-201ENST00000315544 ARHGEF3Q9NR81 526 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 KIAA1549LQ6ZVL6 1849 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 C4BPAP04003 597 aaKnown RBP8.49□□□□□ -1.05
CNOT4-201ENST00000315544 GZMAP12544 262 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 IDEP14735 1019 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 CYLC1P35663 651 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-201ENST00000315544 CAP2P40123 477 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 TXKP42681 527 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 CKAP4Q07065 602 aaKnown RBP8.49□□□□□ -1.05
CNOT4-201ENST00000315544 ANO5Q75V66 913 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 TDRPQ86YL5 185 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 TEX11Q8IYF3 940 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 SLFN12Q8IYM2 578 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 FAM133AQ8N9E0 248 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 BRI3BPQ8WY22 251 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 FAM136AQ96C01 138 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 CCDC17Q96LX7 622 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 TMEM117Q9H0C3 514 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 KDM4CQ9H3R0 1056 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 KCNK13Q9HB14 408 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 BZW2Q9Y6E2 419 aaKnown RBP8.49□□□□□ -1.05
CNOT4-201ENST00000315544 VWA8A3KMH1 1905 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 IGKV6-21A0A0C4DH24 114 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 ATP9AO75110 1047 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 RFX1P22670 979 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 MAGEA6P43360 314 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 RARRES1P49788 294 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 NAPAP54920 295 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 NOGQ13253 232 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 DRP2Q13474 957 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 PREPLQ4J6C6 727 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-201ENST00000315544 MAP1SQ66K74 1059 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-201ENST00000315544 KCTD1Q719H9 257 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 TAX1BP1Q86VP1 789 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 MAP4K3Q8IVH8 894 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 RAPGEF5Q92565 580 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 KAT5Q92993 513 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 ZKSCAN4Q969J2 545 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-201ENST00000315544 CYFIP2Q96F07 1278 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 TRIM47Q96LD4 638 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 SEL1LQ9UBV2 794 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 APEX2Q9UBZ4 518 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 DIS3Q9Y2L1 958 aaKnown RBP8.49□□□□□ -1.05
CNOT4-201ENST00000315544 FAM169AQ9Y6X4 670 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 MANSC4A6NHS7 340 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-201ENST00000315544 FOXN3O00409 490 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-201ENST00000315544 HOXC6P09630 235 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 NBPF12Q5TAG4 269 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-201ENST00000315544 PCNX4Q63HM2 1172 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 EXOC3L1Q86VI1 746 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 KIAA0319LQ8IZA0 1049 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 SAMD3Q8N6K7 520 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 C7orf31Q8N865 590 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 NIPA2Q8N8Q9 360 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 AFAP1L1Q8TED9 768 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 HOOK2Q96ED9 719 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 CAPNS2Q96L46 248 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 ZSWIM4Q9H7M6 989 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 C17orf75Q9HAS0 396 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 ADAMTS1Q9UHI8 967 aa8.49□□□□□ -1.05
CNOT4-201ENST00000315544 HMGB1P1B2RPK0 211 aaPredicted RBP8.48□□□□□ -1.05
CNOT4-201ENST00000315544 ETV4P43268 484 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 PSEN1P49768 467 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 CENPCQ03188 943 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 CCDC15Q0P6D6 951 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 TNFAIP1Q13829 316 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 CNGA2Q16280 664 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 PLEKHG4Q58EX7 1191 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 MCTP2Q6DN12 878 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 CCT8L2Q96SF2 557 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 KIAA1683Q9H0B3 1180 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.48□□□□□ -1.05
CNOT4-201ENST00000315544 GJD2Q9UKL4 321 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 LOC102724159A0A0B4J2E5 919 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 POLR3GO15318 223 aaPredicted RBP8.48□□□□□ -1.05
CNOT4-201ENST00000315544 FTCDO95954 541 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 PYGMP11217 842 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 CREB1P16220 341 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 GUCY1A3Q02108 690 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 PWP2Q15269 919 aaKnown RBP8.48□□□□□ -1.05
CNOT4-201ENST00000315544 TRNP1Q6NT89 227 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 HIBCHQ6NVY1 386 aaPredicted RBP8.48□□□□□ -1.05
CNOT4-201ENST00000315544 TMEM179Q6ZVK1 233 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 MAB21L3Q8N8X9 362 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 CFAP61Q8NHU2 1237 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 RFFLQ8WZ73 363 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 RIT2Q99578 217 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 ZNF341Q9BYN7 854 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 ADAM33Q9BZ11 813 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 TANGO6Q9C0B7 1094 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 PLEKHA4Q9H4M7 779 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 PSTPIP2Q9H939 334 aa8.48□□□□□ -1.05
CNOT4-201ENST00000315544 ARGLU1Q9NWB6 273 aaPredicted RBP8.48□□□□□ -1.05
CNOT4-201ENST00000315544 DNAJC25-GNG10A0A024R161 153 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms