RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 SIK3Q9Y2K2 1263 aa6.62□□□□□ -1.35
PRKDC-201ENST00000314191 CYP3A7-CYP3A51PA0A087WV96 503 aa6.62□□□□□ -1.35
PRKDC-201ENST00000314191 A6NJR5 290 aa6.62□□□□□ -1.35
PRKDC-201ENST00000314191 DYNC1LI2O43237 492 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-201ENST00000314191 CYP3A7P24462 503 aa6.62□□□□□ -1.35
PRKDC-201ENST00000314191 PBX1P40424 430 aa6.62□□□□□ -1.35
PRKDC-201ENST00000314191 PMS2P54278 862 aa6.62□□□□□ -1.35
PRKDC-201ENST00000314191 TMED2Q15363 201 aa6.62□□□□□ -1.35
PRKDC-201ENST00000314191 CCNYQ8ND76 341 aa6.62□□□□□ -1.35
PRKDC-201ENST00000314191 GIMAP7Q8NHV1 300 aa6.62□□□□□ -1.35
PRKDC-201ENST00000314191 IL31RAQ8NI17 732 aa6.62□□□□□ -1.35
PRKDC-201ENST00000314191 BTBD6Q96KE9 485 aa6.62□□□□□ -1.35
PRKDC-201ENST00000314191 PSMD1Q99460 953 aa6.62□□□□□ -1.35
PRKDC-201ENST00000314191 VWA5AO00534 786 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 OATP04181 439 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 TCF7P36402 384 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-201ENST00000314191 CCDC137Q6PK04 289 aaKnown RBP6.61□□□□□ -1.35
PRKDC-201ENST00000314191 ENOSF1Q7L5Y1 443 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 RRP15Q9Y3B9 282 aaKnown RBP6.61□□□□□ -1.35
PRKDC-201ENST00000314191 C1orf186Q6ZWK4 172 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 ANKRD13AQ8IZ07 590 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 AGO4Q9HCK5 861 aaKnown RBP6.61□□□□□ -1.35
PRKDC-201ENST00000314191 SEPT10Q9P0V9 454 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 ATP9AO75110 1047 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 CHRNA3P32297 505 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 PXMP2Q9NR77 195 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 COMMD10Q9Y6G5 202 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 RASGRF2O14827 1237 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 PSMA2P25787 234 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 CCDC6Q16204 474 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 PPP6R3Q5H9R7 873 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-201ENST00000314191 MMGT1Q8N4V1 131 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 MIS12Q9H081 205 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 WEE2P0C1S8 567 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 TAF12Q16514 161 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 BBS9Q3SYG4 887 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 PNMA8AQ86V59 439 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-201ENST00000314191 HACE1Q8IYU2 909 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 CACNA2D3Q8IZS8 1091 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 SNX25Q9H3E2 840 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 OSGEPQ9NPF4 335 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 ADM5C9JUS6 153 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 XPOTO43592 962 aaKnown RBP6.61□□□□□ -1.35
PRKDC-201ENST00000314191 SLC25A27O95847 323 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 RFX1P22670 979 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 LMNB2Q03252 620 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 DUOXA2Q1HG44 320 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 FUT8Q9BYC5 575 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 PIK3R2O00459 728 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 MYO1EQ12965 1108 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 MEA1Q16626 185 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 SLC20A1Q8WUM9 679 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 TATDN2Q93075 761 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 TARSL2A2RTX5 802 aaKnown RBP6.61□□□□□ -1.35
PRKDC-201ENST00000314191 P4HA2O15460 535 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 MAN1A1P33908 653 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 PSMC1P62191 440 aaKnown RBP6.61□□□□□ -1.35
PRKDC-201ENST00000314191 PPP1R2P3Q6NXS1 205 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 FASTKD5Q7L8L6 764 aaKnown RBP6.61□□□□□ -1.35
PRKDC-201ENST00000314191 NME8Q8N427 588 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 RPS6KC1Q96S38 1066 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 FMN2Q9NZ56 1722 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 KCNJ1P48048 391 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 CDK17Q00537 523 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 ITIH3Q06033 890 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 GKAP1Q5VSY0 366 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-201ENST00000314191 RSRC2Q7L4I2 434 aaKnown RBP6.61□□□□□ -1.35
PRKDC-201ENST00000314191 ETNPPLQ8TBG4 499 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 TRIM7Q9C029 511 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 UBE4BO95155 1302 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 RCCD1A6NED2 376 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 ALDH3A1P30838 453 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 FYB2Q5VWT5 728 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 XRRA1Q6P2D8 792 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 BTNL9Q6UXG8 535 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 KCTD6Q8NC69 237 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 TPCN2Q8NHX9 752 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 GINM1Q9NU53 330 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 PNMA3Q9UL41 463 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 MAGED2Q9UNF1 606 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-201ENST00000314191 LRRIQ3A6PVS8 624 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-201ENST00000314191 COMTP21964 271 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 MMS22LQ6ZRQ5 1243 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 TMEM139Q8IV31 216 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 TMEM8AQ9HCN3 771 aa6.61□□□□□ -1.35
PRKDC-201ENST00000314191 ITGB5P18084 799 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 EFNA5P52803 228 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 EIF3BP55884 814 aaKnown RBP6.6□□□□□ -1.35
PRKDC-201ENST00000314191 TMEM62Q0P6H9 643 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 POTEAQ6S8J7 498 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 TRAPPC11Q7Z392 1133 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 RHOT1Q8IXI2 618 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 FAM84AQ96KN4 292 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 CAPN7Q9Y6W3 813 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 SUPT20HL2P0C7V6 817 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 JAG1P78504 1218 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 SYNGAP1Q96PV0 1343 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 COL1A1P02452 1464 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-201ENST00000314191 TBXAS1P24557 533 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-201ENST00000314191 LRRC55Q6ZSA7 311 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms