RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 SFR1Q86XK3 245 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 GJA10Q969M2 543 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 TSNARE1Q96NA8 513 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 NACA2Q9H009 215 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 RBMX2Q9Y388 322 aaKnown RBP13.09□□□□□ -0.31
EBF1-201ENST00000313708 PCDH11XQ9BZA7 1347 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 ATP7AQ04656 1500 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.09□□□□□ -0.31
EBF1-201ENST00000313708 SMCO2A6NFE2 343 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 CYP2J2P51589 502 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 GALCP54803 685 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 LMNB2Q03252 620 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 POTEEQ6S8J3 1075 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 KCNH5Q8NCM2 988 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 RBM46Q8TBY0 533 aaKnown RBP13.09□□□□□ -0.31
EBF1-201ENST00000313708 DCUN1D5Q9BTE7 237 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 ZNF287Q9HBT7 754 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.09□□□□□ -0.31
EBF1-201ENST00000313708 ZBBXA8MT70 800 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 A8MXQ7 604 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 XPOTO43592 962 aaKnown RBP13.09□□□□□ -0.31
EBF1-201ENST00000313708 LPXNO60711 386 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 AUHQ13825 339 aaKnown RBP13.09□□□□□ -0.31
EBF1-201ENST00000313708 KHDC1Q4VXA5 237 aaKnown RBP13.09□□□□□ -0.31
EBF1-201ENST00000313708 LPCAT2Q7L5N7 544 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 PDZD8Q8NEN9 1154 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 IGDCC4Q8TDY8 1250 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 TIPINQ9BVW5 301 aa13.09□□□□□ -0.31
EBF1-201ENST00000313708 TTC7AQ9ULT0 858 aaPredicted RBP13.09□□□□□ -0.31
EBF1-201ENST00000313708 NFKBIAP25963 317 aa13.08□□□□□ -0.31
EBF1-201ENST00000313708 OASLQ15646 514 aaKnown RBP13.08□□□□□ -0.31
EBF1-201ENST00000313708 ATG16L1Q676U5 607 aa13.08□□□□□ -0.31
EBF1-201ENST00000313708 NSMFQ6X4W1 530 aa13.08□□□□□ -0.31
EBF1-201ENST00000313708 PRPF39Q86UA1 669 aaKnown RBP13.08□□□□□ -0.31
EBF1-201ENST00000313708 SATL1Q86VE3 508 aa13.08□□□□□ -0.31
EBF1-201ENST00000313708 ECHDC2Q86YB7 292 aa13.08□□□□□ -0.31
EBF1-201ENST00000313708 RHOT2Q8IXI1 618 aa13.08□□□□□ -0.31
EBF1-201ENST00000313708 ZCRB1Q8TBF4 217 aaKnown RBP13.08□□□□□ -0.31
EBF1-201ENST00000313708 YIPF2Q9BWQ6 316 aa13.08□□□□□ -0.31
EBF1-201ENST00000313708 TRIM9Q9C026 710 aa13.08□□□□□ -0.31
EBF1-201ENST00000313708 TXNDC16Q9P2K2 825 aa13.08□□□□□ -0.31
EBF1-201ENST00000313708 MARCOQ9UEW3 520 aaPredicted RBP13.08□□□□□ -0.31
EBF1-201ENST00000313708 CAV1Q03135 178 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 TXNRD1Q16881 649 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 NXNQ6DKJ4 435 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 PDXDC2PQ6P474 469 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 CROCCP3Q8IVE0 287 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 FAM186BQ8IYM0 893 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 GDPD5Q8WTR4 605 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 SERPINI1Q99574 410 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 LZTS2Q9BRK4 669 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 HEMGNQ9BXL5 484 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 EPS15L1Q9UBC2 864 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 ZNF229Q9UJW7 825 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 TRPC5Q9UL62 973 aaPredicted RBP13.08□□□□□ -0.32
EBF1-201ENST00000313708 PHF24Q9UPV7 400 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 IGSF1Q8N6C5 1336 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 ADCY6O43306 1168 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 SLF2Q8IX21 1173 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 DGCR14Q96DF8 476 aaKnown RBP13.08□□□□□ -0.32
EBF1-201ENST00000313708 CAAP1Q9H8G2 361 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 GINM1Q9NU53 330 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 MCM9Q9NXL9 1143 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 GOLGA8SH3BPF8 625 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 GOLGA8MH3BSY2 632 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 SMAPO00193 183 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 ZNF263O14978 683 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 DDAH1O94760 285 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 SH3TC2Q8TF17 1288 aa13.08□□□□□ -0.32
EBF1-201ENST00000313708 GLI2P10070 1586 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 CIITAP33076 1130 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 CHN2P52757 468 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 CCDC138Q96M89 665 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 MED15Q96RN5 788 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 MAF1Q9H063 256 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 HBS1LQ9Y450 684 aaKnown RBP13.07□□□□□ -0.32
EBF1-201ENST00000313708 IVNS1ABPQ9Y6Y0 642 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 SGK1O00141 431 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 CLIC2O15247 247 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 NAA20P61599 178 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 IZUMO3Q5VZ72 239 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 EXOC3L1Q86VI1 746 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 PPP1R14BQ96C90 147 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 KLF6Q99612 283 aaPredicted RBP13.07□□□□□ -0.32
EBF1-201ENST00000313708 TRPV6Q9H1D0 765 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 PALM3A6NDB9 673 aaPredicted RBP13.07□□□□□ -0.32
EBF1-201ENST00000313708 SEC24DO94855 1032 aaPredicted RBP13.07□□□□□ -0.32
EBF1-201ENST00000313708 ANPEPP15144 967 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 BPIFB4P59827 614 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 REXO1Q8N1G1 1221 aaKnown RBP13.07□□□□□ -0.32
EBF1-201ENST00000313708 PYROXD1Q8WU10 500 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 CTTNQ14247 550 aaKnown RBP13.07□□□□□ -0.32
EBF1-201ENST00000313708 TRMT5Q32P41 509 aaKnown RBP13.07□□□□□ -0.32
EBF1-201ENST00000313708 CENPUQ71F23 418 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 ZBED8Q8IZ13 594 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 ATP2A3Q93084 1043 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 WWP1Q9H0M0 922 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 MANSC1Q9H8J5 431 aa13.07□□□□□ -0.32
EBF1-201ENST00000313708 APOBEC2Q9Y235 224 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms