RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 IKBKEQ14164 716 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 MYBPC2Q14324 1141 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 NOLC1Q14978 699 aaKnown RBP eCLIP13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 TMEM132AQ24JP5 1023 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 EDRF1Q3B7T1 1238 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 ZNF568Q3ZCX4 644 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 TWF2Q6IBS0 349 aaKnown RBP13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 TTI2Q6NXR4 508 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 PSRC1Q6PGN9 363 aaPredicted RBP13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 ZNF365Q70YC5 407 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 SLC24A5Q71RS6 500 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 MRPL10Q7Z7H8 261 aaKnown RBP13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 ZNF598Q86UK7 904 aaKnown RBP13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 SLC9A9Q8IVB4 645 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 ZC3H3Q8IXZ2 948 aaKnown RBP13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 CRIPAKQ8N1N5 446 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 SMG8Q8ND04 991 aaKnown RBP13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 NELFBQ8WX92 580 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 ADPGKQ9BRR6 497 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 CBWD1Q9BRT8 395 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 FAM105AQ9NUU6 356 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 ANKFY1Q9P2R3 1169 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 DACH1Q9UI36 760 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 RWDD2AQ9UIY3 292 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 PCDHB2Q9Y5E7 798 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 SCN5AQ14524 2016 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 TET1Q8NFU7 2136 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 KIAA0391O15091 583 aaKnown RBP13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 CALUO43852 315 aaPredicted RBP13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 NPTXRO95502 500 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 FGBP02675 491 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 ACTN1P12814 892 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 ATF7P17544 494 aaPredicted RBP13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 RAB27AP51159 221 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 ZNF445P59923 1031 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 RASIP1Q5U651 963 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 ANKRD40Q6AI12 368 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 KLHL10Q6JEL2 608 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 C11orf57Q6ZUT1 292 aaPredicted RBP13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 APBB1IPQ7Z5R6 666 aaPredicted RBP13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 ZBTB33Q86T24 672 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 ECHDC2Q86YB7 292 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 POMGNT1Q8WZA1 660 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 HERVK_113Q902F9 699 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 FBXL18Q96ME1 805 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 DUSP9Q99956 384 aaKnown RBP13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 GDF15Q99988 308 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.82□□□□□ -0.21e-9■■□□□ 11.7
CHMP2A-201ENST00000312547 TCHPQ9BT92 498 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 GZF1Q9H116 711 aaPredicted RBP13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 HSPBP1Q9NZL4 362 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 CTNND2Q9UQB3 1225 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 IPPQ9Y573 584 aa13.82□□□□□ -0.2
CHMP2A-201ENST00000312547 BICDL2A1A5D9 508 aa13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 TRIM49BA6NDI0 452 aa13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 CLIC2O15247 247 aa13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 OGTO15294 1046 aa13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 NR3C1P04150 777 aa13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 SKIP12755 728 aa13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 GRM5P41594 1212 aa13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 ARMCX5Q6P1M9 558 aa13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.81□□□□□ -0.22e-9■■■■■ 99.2
CHMP2A-201ENST00000312547 LRRC55Q6ZSA7 311 aa13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 CEP120Q8N960 986 aa13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 MSTO1Q9BUK6 570 aa13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 DNAJC25Q9H1X3 360 aa13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 RNF39Q9H2S5 420 aa13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 NXF3Q9H4D5 531 aaKnown RBP13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 ELAC1Q9H777 363 aaKnown RBP13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 AGO2Q9UKV8 859 aaKnown RBP13.81□□□□□ -0.2
CHMP2A-201ENST00000312547 MEFVO15553 781 aaPredicted RBP13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 EXTL3O43909 919 aa13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 EOMESO95936 686 aa13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 HARSP12081 509 aaKnown RBP13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 STX17P56962 302 aa13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 WDR5P61964 334 aaKnown RBP13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 POU5F1Q01860 360 aaKnown RBP13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 KYAT1Q16773 422 aa13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 ANO6Q4KMQ2 910 aa13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 ZBTB41Q5SVQ8 909 aa13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 CRELD2Q6UXH1 353 aaPredicted RBP13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 OTOP2Q7RTS6 562 aa13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 XXYLT1Q8NBI6 393 aa13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 ZSWIM2Q8NEG5 633 aa13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 TSG101Q99816 390 aa13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 TRIM6Q9C030 488 aaPredicted RBP13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 PCIF1Q9H4Z3 704 aa13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 TMEM161AQ9NX61 479 aa13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 CPSF3Q9UKF6 684 aaKnown RBP13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 HES2Q9Y543 173 aa13.8□□□□□ -0.2
CHMP2A-201ENST00000312547 MEIS3P2A8K0S8 358 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 LDHAP00338 332 aaKnown RBP13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 ADRB2P07550 413 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 CLTAP09496 248 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 STAG3L1P0CL83 205 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 NR2F2P24468 414 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 RPL13P26373 211 aaKnown RBP13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 MATR3P43243 847 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 CYP2J2P51589 502 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 DEFB103AP81534 67 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms