RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 PDIA5Q14554 519 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 ARHGEF18Q6ZSZ5 1173 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 RFFLQ8WZ73 363 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 DNAJC19Q96DA6 116 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 DDX50Q9BQ39 737 aaKnown RBP19.31■□□□□ 0.68
SPSB4-201ENST00000310546 NPHP3-ACAD11A0A0J9YXS1 232 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 PPEF1O14829 653 aaPredicted RBP19.31■□□□□ 0.68
SPSB4-201ENST00000310546 GSTA2P09210 222 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 CHRNA3P32297 505 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 RRP1BQ14684 758 aaKnown RBP19.31■□□□□ 0.68
SPSB4-201ENST00000310546 ECM1Q16610 540 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 SYCP3Q8IZU3 236 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 SPOCK2Q92563 424 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 GJA10Q969M2 543 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 SERPINB12Q96P63 405 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 NDNQ99608 321 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 TMEM260Q9NX78 707 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 STX8Q9UNK0 236 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 TMEM110-MUSTN1A8MSY1 372 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 PRKCIP41743 596 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 CALCOCO2Q13137 446 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 PICALMQ13492 652 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 ACVR2BQ13705 512 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 RCN1Q15293 331 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 RFWD3Q6PCD5 774 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 DIS3Q9Y2L1 958 aaKnown RBP19.3■□□□□ 0.68
SPSB4-201ENST00000310546 MAPK13O15264 365 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 SLC37A4O43826 429 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 T-ENOLP0DO92 83 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 VCAM1P19320 739 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 WASHC2DQ5SRD0 308 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 ZNF804AQ7Z570 1209 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 CYP4X1Q8N118 509 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 ATL2Q8NHH9 583 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 SCFD1Q8WVM8 642 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 POP1Q99575 1024 aaKnown RBP19.3■□□□□ 0.68
SPSB4-201ENST00000310546 SLCO1B3Q9NPD5 702 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 IL17RBQ9NRM6 502 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 BMP2KQ9NSY1 1161 aaPredicted RBP19.3■□□□□ 0.68
SPSB4-201ENST00000310546 EMILIN3Q9NT22 766 aa19.3■□□□□ 0.68
SPSB4-201ENST00000310546 MARCKSL1P49006 195 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 MARSP56192 900 aaKnown RBP19.29■□□□□ 0.68
SPSB4-201ENST00000310546 LNX1Q8TBB1 728 aaPredicted RBP19.29■□□□□ 0.68
SPSB4-201ENST00000310546 DTX3LQ8TDB6 740 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 KRT35Q92764 455 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 INPP5DQ92835 1189 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 ARHGEF26Q96DR7 871 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 DCP1AQ9NPI6 582 aaPredicted RBP19.29■□□□□ 0.68
SPSB4-201ENST00000310546 USP20Q9Y2K6 914 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 USP17L3A6NCW0 530 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 USP17L4A6NCW7 530 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 TDP2O95551 362 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 UBTFL6P0CB48 400 aaPredicted RBP19.29■□□□□ 0.68
SPSB4-201ENST00000310546 XRCC5P13010 732 aaKnown RBP19.29■□□□□ 0.68
SPSB4-201ENST00000310546 RASSF2P50749 326 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 STRN3Q13033 797 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 CTTNQ14247 550 aaKnown RBP19.29■□□□□ 0.68
SPSB4-201ENST00000310546 USP17L1Q7RTZ2 530 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 ZDHHC14Q8IZN3 488 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 GRAMD1AQ96CP6 724 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 LRRC27Q9C0I9 530 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 C6orf50Q9HD87 102 aa19.29■□□□□ 0.68
SPSB4-201ENST00000310546 TTC36A6NLP5 189 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 ZCCHC18P0CG32 403 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 KYNUQ16719 465 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 SPTY2D1Q68D10 685 aaPredicted RBP19.28■□□□□ 0.68
SPSB4-201ENST00000310546 DPY19L2P1Q6NXN4 242 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 OPTNQ96CV9 577 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 RAB34Q9BZG1 259 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 DMAP1Q9NPF5 467 aaPredicted RBP19.28■□□□□ 0.68
SPSB4-201ENST00000310546 PCDHAC2Q9Y5I4 1007 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 USH1CQ9Y6N9 552 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 TJP3O95049 919 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 MARK3P27448 753 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 YARSP54577 528 aaKnown RBP19.28■□□□□ 0.68
SPSB4-201ENST00000310546 PPATQ06203 517 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 NRG4Q8WWG1 115 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 ART4Q93070 314 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 THAP2Q9H0W7 228 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 GCNT4Q9P109 453 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 INTUQ9ULD6 942 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 NENFQ9UMX5 172 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 PCDHA3Q9Y5H8 950 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 TCRBV7S2A1N4TA0A589 114 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 BBOX1O75936 387 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 GNA11P29992 359 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 GRM4Q14833 912 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 TRMT10CQ7L0Y3 403 aaKnown RBP19.28■□□□□ 0.68
SPSB4-201ENST00000310546 MTMR9Q96QG7 549 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 ZC3H12CQ9C0D7 883 aaKnown RBP19.28■□□□□ 0.68
SPSB4-201ENST00000310546 KCTD10Q9H3F6 313 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 PHTF1Q9UMS5 762 aa19.28■□□□□ 0.68
SPSB4-201ENST00000310546 SIGLEC16A6NMB1 481 aa19.27■□□□□ 0.68
SPSB4-201ENST00000310546 FAM196BA6NMK8 535 aa19.27■□□□□ 0.68
SPSB4-201ENST00000310546 CAPN9O14815 690 aa19.27■□□□□ 0.68
SPSB4-201ENST00000310546 STAT1P42224 750 aa19.27■□□□□ 0.68
SPSB4-201ENST00000310546 IL9RQ01113 521 aa19.27■□□□□ 0.68
SPSB4-201ENST00000310546 MCL1Q07820 350 aa19.27■□□□□ 0.68
SPSB4-201ENST00000310546 DPP8Q6V1X1 898 aaPredicted RBP19.27■□□□□ 0.68
SPSB4-201ENST00000310546 DSTYKQ6XUX3 929 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms