RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 TTC8Q8TAM2 541 aa13.95□□□□□ -0.18
SNED1-201ENST00000310397 RNF25Q96BH1 459 aaPredicted RBP13.95□□□□□ -0.18
SNED1-201ENST00000310397 TUFT1Q9NNX1 390 aa13.95□□□□□ -0.18
SNED1-201ENST00000310397 SUCLA2Q9P2R7 463 aaPredicted RBP13.95□□□□□ -0.18
SNED1-201ENST00000310397 HEATR6Q6AI08 1181 aaKnown RBP13.94□□□□□ -0.18
SNED1-201ENST00000310397 RIN2Q8WYP3 895 aaPredicted RBP13.94□□□□□ -0.18
SNED1-201ENST00000310397 MARK3P27448 753 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 KCTD2Q14681 263 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 REXO1L1PQ8IX06 675 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 USP38Q8NB14 1042 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 PSMC3IPQ9P2W1 217 aaPredicted RBP13.94□□□□□ -0.18
SNED1-201ENST00000310397 PP2D1A8MPX8 630 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 H3BRJ5 948 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 PTGISQ16647 500 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 TMEM259Q4ZIN3 620 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 RABGAP1LQ5R372 815 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 SCARA5Q6ZMJ2 495 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 FAM193BQ96PV7 902 aaPredicted RBP13.94□□□□□ -0.18
SNED1-201ENST00000310397 C11orf70Q9BRQ4 267 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 PHF20L1A8MW92 1017 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 E2F6O75461 281 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 MAPK6Q16659 721 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 SUSD4Q5VX71 490 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 C1orf54Q8WWF1 131 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 MINPP1Q9UNW1 487 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 MTO1Q9Y2Z2 717 aaKnown RBP13.94□□□□□ -0.18
SNED1-201ENST00000310397 CRB1P82279 1406 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 SRGAP2CP0DJJ0 459 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 ZNF746Q6NUN9 644 aaPredicted RBP13.94□□□□□ -0.18
SNED1-201ENST00000310397 RCOR2Q8IZ40 523 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 KCTD17Q8N5Z5 321 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 PIGBQ92521 554 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 ANKS1AQ92625 1134 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 KCND2Q9NZV8 630 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 VPS11Q9H270 941 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 RAD51CO43502 376 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 GUCY1A2P33402 732 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 AARSP49588 968 aaKnown RBP eCLIP13.94□□□□□ -0.18
SNED1-201ENST00000310397 YWHAHQ04917 246 aaPredicted RBP13.94□□□□□ -0.18
SNED1-201ENST00000310397 ITIH4Q14624 930 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 KPNB1Q14974 876 aaKnown RBP13.94□□□□□ -0.18
SNED1-201ENST00000310397 GADL1Q6ZQY3 521 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 FAM167AQ96KS9 214 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 FSD1LQ9BXM9 530 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 SLC40A1Q9NP59 571 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 TRIM10Q9UDY6 481 aa13.94□□□□□ -0.18
SNED1-201ENST00000310397 USP17L15C9J2P7 530 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 USP17L13C9JLJ4 530 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 USP17L11C9JVI0 530 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 USP17L18D6R9N7 530 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 USP17L22D6RA61 530 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 USP17L17D6RBQ6 530 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 USP17L19D6RCP7 530 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 USP17L20D6RJB6 530 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 NMT2O60551 498 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 SCP2P22307 547 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 AP3M2P53677 418 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 USP17L24Q0WX57 530 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 USP17L6PQ6QN14 398 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 ZBTB33Q86T24 672 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 RNF139Q8WU17 664 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 EIF2AK1Q9BQI3 630 aaKnown RBP13.93□□□□□ -0.18
SNED1-201ENST00000310397 NPHS2Q9NP85 383 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 STX18Q9P2W9 335 aaKnown RBP13.93□□□□□ -0.18
SNED1-201ENST00000310397 GALCP54803 685 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 CMTM5Q96DZ9 223 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 RBM15Q96T37 977 aaKnown RBP eCLIP13.93□□□□□ -0.18
SNED1-201ENST00000310397 ABCB11O95342 1321 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 SMAPO00193 183 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 SPAG6O75602 509 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 IL10P22301 178 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 SRBD1Q8N5C6 995 aaKnown RBP13.93□□□□□ -0.18
SNED1-201ENST00000310397 DNAJC9Q8WXX5 260 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 EYA4O95677 639 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 CARSP49589 748 aaKnown RBP13.93□□□□□ -0.18
SNED1-201ENST00000310397 EML4Q9HC35 981 aaKnown RBP13.93□□□□□ -0.18
SNED1-201ENST00000310397 GTSE1Q9NYZ3 720 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 MAGED2Q9UNF1 606 aaPredicted RBP13.93□□□□□ -0.18
SNED1-201ENST00000310397 KCNA3P22001 575 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 CIITAP33076 1130 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 CCNA1P78396 465 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 LCA5Q86VQ0 697 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 RHPN2Q8IUC4 686 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 ANKRD27Q96NW4 1050 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 CYP4F11Q9HBI6 524 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 AP3B1O00203 1094 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 KCNA4P22459 653 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 TYK2P29597 1187 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 BCAR1P56945 870 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 TNFAIP2Q03169 654 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 BIRC2Q13490 618 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 ADGRF4Q8IZF3 695 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 ISCA1Q9BUE6 129 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 KDM4CQ9H3R0 1056 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 EHD2Q9NZN4 543 aa13.93□□□□□ -0.18
SNED1-201ENST00000310397 P4HBP07237 508 aaKnown RBP13.92□□□□□ -0.18
SNED1-201ENST00000310397 HLFQ16534 295 aa13.92□□□□□ -0.18
SNED1-201ENST00000310397 RCSD1Q6JBY9 416 aa13.92□□□□□ -0.18
SNED1-201ENST00000310397 SERPINB12Q96P63 405 aa13.92□□□□□ -0.18
SNED1-201ENST00000310397 CARD9Q9H257 536 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms