RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CNGA4Q8IV77 575 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 ZBTB8OSQ8IWT0 167 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 KIAA0319LQ8IZA0 1049 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 PCMTD1Q96MG8 357 aaPredicted RBP7.59□□□□□ -1.2
PTCD2-201ENST00000308077 PANX2Q96RD6 677 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 LSM14BQ9BX40 385 aaKnown RBP7.59□□□□□ -1.2
PTCD2-201ENST00000308077 MMRN2Q9H8L6 949 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 MAST4O15021 2626 aa7.59□□□□□ -1.2
PTCD2-201ENST00000308077 A0A087WZ62 844 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 RBAK-RBAKDNI3L0D1 243 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 B4GALT5O43286 388 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 CSDE1O75534 798 aaKnown RBP7.58□□□□□ -1.2
PTCD2-201ENST00000308077 RARBP10826 455 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 ACTN1P12814 892 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 TRIM21P19474 475 aaKnown RBP7.58□□□□□ -1.2
PTCD2-201ENST00000308077 SLC9A1P19634 815 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 FECHP22830 423 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 HOXC8P31273 242 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 KRT9P35527 623 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 FMO5P49326 533 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 GPC3P51654 580 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 VAMP7P51809 220 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 POU5F1BQ06416 359 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 PPP3CAQ08209 521 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 GNASQ5JWF2 1037 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 ZBTB41Q5SVQ8 909 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 CRELD2Q6UXH1 353 aaPredicted RBP7.58□□□□□ -1.2
PTCD2-201ENST00000308077 INTS8Q75QN2 995 aaKnown RBP7.58□□□□□ -1.2
PTCD2-201ENST00000308077 GPD1LQ8N335 351 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 CCDC112Q8NEF3 446 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 RAET1EQ8TD07 263 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 ERO1AQ96HE7 468 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 MFSD14AQ96MC6 490 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 DNAJC7Q99615 494 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 ACO2Q99798 780 aaKnown RBP7.58□□□□□ -1.2
PTCD2-201ENST00000308077 BAG1Q99933 345 aaPredicted RBP7.58□□□□□ -1.2
PTCD2-201ENST00000308077 FDXACB1Q9BRP7 624 aaPredicted RBP7.58□□□□□ -1.2
PTCD2-201ENST00000308077 NUP58Q9BVL2 599 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 NFKBIZQ9BYH8 718 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 C2orf40Q9H1Z8 148 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 GANQ9H2C0 597 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 FZD8Q9H461 694 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 XPNPEP3Q9NQH7 507 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 ANKFY1Q9P2R3 1169 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 HDAC6Q9UBN7 1215 aa7.58□□□□□ -1.2
PTCD2-201ENST00000308077 A0A0B4J269 797 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 A0A1W2PQJ5 194 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 LRRIQ3A6PVS8 624 aaPredicted RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 INO80B-WBP1J3KQ70 363 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 TREHO43280 583 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 ZNF500O60304 480 aaPredicted RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 FAM189A1O60320 539 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 GNRH1P01148 92 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 TPM1P09493 284 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 KRT13P13646 458 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 ANK1P16157 1881 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 PON1P27169 355 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 TMOD1P28289 359 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 CENPFP49454 3210 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 WNT7BP56706 349 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 NLRP11P59045 1033 aaKnown RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 CYP24A1Q07973 514 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 MAPK6Q16659 721 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 AMHR2Q16671 573 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 E4F1Q66K89 784 aaPredicted RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 CCSAPQ6IQ19 270 aaPredicted RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 WDR59Q6PJI9 974 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 CXCL17Q6UXB2 119 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 ZPBP2Q6X784 338 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 KLHDC9Q8NEP7 349 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 NEK11Q8NG66 645 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 ADAMTS19Q8TE59 1207 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 PXYLP1Q8TE99 480 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 BAP1Q92560 729 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 ARMC5Q96C12 935 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 CCDC51Q96ER9 411 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 FAM213AQ9BRX8 229 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 KATNAL1Q9BW62 490 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 MRPL4Q9BYD3 311 aaKnown RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 INO80BQ9C086 356 aaPredicted RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 FAM49AQ9H0Q0 323 aaPredicted RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 SIX2Q9NPC8 291 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 AGO2Q9UKV8 859 aaKnown RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 LUC7L2Q9Y383 392 aaKnown RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 HTTP42858 3142 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 SMIM35A0A1B0GVV1 85 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 GTPBP10A4D1E9 387 aaKnown RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 SOWAHDA6NJG2 315 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 USP27XA6NNY8 438 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 ACKR2O00590 384 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 EXTL3O43909 919 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 STX10O60499 249 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 GPR32O75388 356 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 CYP2C9P11712 490 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 PROZP22891 400 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 PHKA2P46019 1235 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 ACOT2P49753 483 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 ZBED6P86452 979 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 TMEM62Q0P6H9 643 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 MTF1Q14872 753 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms