RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ABT1Q9ULW3 272 aaKnown RBP13.38□□□□□ -0.27
USP38-201ENST00000307017 A0A0G2JLW4 131 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 NMT1P30419 496 aaKnown RBP13.38□□□□□ -0.27
USP38-201ENST00000307017 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.38□□□□□ -0.27
USP38-201ENST00000307017 C9orf72Q96LT7 481 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 AGPAT5Q9NUQ2 364 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 ZCCHC18P0CG32 403 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 PAMP19021 973 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 CATSPER4Q7RTX7 472 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 PLD3Q8IV08 490 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 ARHGAP18Q8N392 663 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 TTC8Q8TAM2 541 aa13.38□□□□□ -0.27
USP38-201ENST00000307017 DAB1O75553 588 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 ARIH2O95376 493 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 PDGFRBP09619 1106 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 CC2D2BQ6DHV5 1058 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 TWF2Q6IBS0 349 aaKnown RBP13.37□□□□□ -0.27
USP38-201ENST00000307017 ADCK2Q7Z695 626 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 PI4K2AQ9BTU6 479 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 SLC7A5P2Q9GIP4 190 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 CDV3Q9UKY7 258 aaKnown RBP13.37□□□□□ -0.27
USP38-201ENST00000307017 BLMP54132 1417 aaPredicted RBP13.37□□□□□ -0.27
USP38-201ENST00000307017 EDC4Q6P2E9 1401 aaKnown RBP13.37□□□□□ -0.27
USP38-201ENST00000307017 C21orf2O43822 256 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 STXBP2Q15833 593 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 MXD3Q9BW11 206 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 TDRD3Q9H7E2 651 aaKnown RBP13.37□□□□□ -0.27
USP38-201ENST00000307017 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 GRIN2AQ12879 1464 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 TYK2P29597 1187 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 PRDX5P30044 214 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 CEP78Q5JTW2 689 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 CYP4A22Q5TCH4 519 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 OPTNQ96CV9 577 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 TRIM11Q96F44 468 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 C17orf80Q9BSJ5 609 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 SYTL2Q9HCH5 934 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 FAM135BQ49AJ0 1406 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 CAND2O75155 1236 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 VAMP7P51809 220 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 AKIRIN2Q53H80 203 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 FAXCQ5TGI0 409 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 RGL1Q9NZL6 768 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 POLRMTO00411 1230 aaKnown RBP13.37□□□□□ -0.27
USP38-201ENST00000307017 ACOT2P49753 483 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 CDH6P55285 790 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 ARL13BQ3SXY8 428 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 FAM117BQ6P1L5 589 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 IYDQ6PHW0 289 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 RAD54LQ92698 747 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 ATP6V1G3Q96LB4 118 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 PLEKHF1Q96S99 279 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 ZBED2Q9BTP6 218 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 RCOR1Q9UKL0 485 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 EMSYQ7Z589 1322 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 DDHD2O94830 711 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 APRTP07741 180 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 GRK2P25098 689 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 FSCBQ5H9T9 825 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 RABGAP1LQ5R372 815 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 USP6NLQ92738 828 aa13.37□□□□□ -0.27
USP38-201ENST00000307017 KCNJ1P48048 391 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 RNF219Q5W0B1 726 aaPredicted RBP13.36□□□□□ -0.27
USP38-201ENST00000307017 ARHGEF1Q92888 912 aaKnown RBP13.36□□□□□ -0.27
USP38-201ENST00000307017 EPAS1Q99814 870 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 SLC9A2Q9UBY0 812 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 MAD2L2Q9UI95 211 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 PRR23AA6NEV1 266 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 SERPINB4P48594 390 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 GSSP48637 474 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 FMR1Q06787 632 aaKnown RBP eCLIP13.36□□□□□ -0.272e-6■■■□□ 15.4
USP38-201ENST00000307017 SUSD4Q5VX71 490 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 DDX53Q86TM3 631 aaKnown RBP13.36□□□□□ -0.27
USP38-201ENST00000307017 THAP11Q96EK4 314 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 SNF8Q96H20 258 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 TMEM117Q9H0C3 514 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 EXOSC4Q9NPD3 245 aaKnown RBP13.36□□□□□ -0.27
USP38-201ENST00000307017 SEL1LQ9UBV2 794 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 CHMP2BQ9UQN3 213 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 ELF1P32519 619 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 DMPKQ09013 629 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 EPHA10Q5JZY3 1008 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 HEATR6Q6AI08 1181 aaKnown RBP13.36□□□□□ -0.27
USP38-201ENST00000307017 CHUKO15111 745 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 KRT37O76014 449 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 SEZ6Q53EL9 994 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 CEP55Q53EZ4 464 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 TAF1DQ9H5J8 278 aaPredicted RBP13.36□□□□□ -0.27
USP38-201ENST00000307017 LOC102724428A0A0B4J2F2 783 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 SPDYE5A6NIY4 337 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 SIK1P57059 783 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 SPDYE7PQ495Y7 208 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 PRPF39Q86UA1 669 aaKnown RBP13.36□□□□□ -0.27
USP38-201ENST00000307017 CUEDC2Q9H467 287 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 MYOM2P54296 1465 aa13.36□□□□□ -0.27
USP38-201ENST00000307017 UPP2O95045 317 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 IMPDH2P12268 514 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 DDX5P17844 614 aaKnown RBP13.35□□□□□ -0.27
USP38-201ENST00000307017 OSBPP22059 807 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 ADSLP30566 484 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms