RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 TTLL13PA6NNM8 815 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 EPHB6O15197 1021 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 PMM2O15305 246 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 TREHO43280 583 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 GRK4P32298 578 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 GTF2H1P32780 548 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 ACOT2P49753 483 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 MCL1Q07820 350 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 KCNA10Q16322 511 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 CBWD6Q4V339 395 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 CBWD3Q5JTY5 395 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 CBWD5Q5RIA9 395 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 MPZL3Q6UWV2 235 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 RNF180Q86T96 592 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 NME8Q8N427 588 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 PPP1R13LQ8WUF5 828 aa19.05■□□□□ 0.64
KRT28-201ENST00000306658 GCOM2Q9BZD3 368 aaPredicted RBP19.05■□□□□ 0.64
KRT28-201ENST00000306658 NOL4O94818 638 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 MYCNP04198 464 aaPredicted RBP19.04■□□□□ 0.64
KRT28-201ENST00000306658 INHAP05111 366 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 ASGR1P07306 291 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 IQCF3P0C7M6 154 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 PROZP22891 400 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 POLR2FP61218 127 aaKnown RBP19.04■□□□□ 0.64
KRT28-201ENST00000306658 PPP3CAQ08209 521 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 HIC1Q14526 733 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 NOLC1Q14978 699 aaKnown RBP eCLIP19.04■□□□□ 0.64
KRT28-201ENST00000306658 NBPF20Q3BBV1 942 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 C1orf220Q5T0J3 134 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 PLEKHO2Q8TD55 490 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 FNBP1Q96RU3 617 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 ADAMTS10Q9H324 1103 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 PTPRHQ9HD43 1115 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 HMX1Q9NP08 348 aaPredicted RBP19.04■□□□□ 0.64
KRT28-201ENST00000306658 FBXL5Q9UKA1 691 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 TRIM17Q9Y577 477 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 SCN10AQ9Y5Y9 1956 aa19.04■□□□□ 0.64
KRT28-201ENST00000306658 LRRIQ3A6PVS8 624 aaPredicted RBP19.03■□□□□ 0.64
KRT28-201ENST00000306658 TULP1O00294 542 aaPredicted RBP19.03■□□□□ 0.64
KRT28-201ENST00000306658 OGTO15294 1046 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 B4GALT5O43286 388 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 ERLIN2O94905 339 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 GCLMP48507 274 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 MXI1P50539 228 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 PSMD6Q15008 389 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 PCBP1Q15365 356 aaKnown RBP eCLIP19.03■□□□□ 0.64
KRT28-201ENST00000306658 KIZQ2M2Z5 673 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 KLHDC7AQ5VTJ3 777 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 TAF2Q6P1X5 1199 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 TRIM65Q6PJ69 517 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 CRELD2Q6UXH1 353 aaPredicted RBP19.03■□□□□ 0.64
KRT28-201ENST00000306658 RUFY4Q6ZNE9 571 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 RRAGAQ7L523 313 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 ZBTB33Q86T24 672 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 DNAJB3Q8WWF6 145 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 GANQ9H2C0 597 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 NLRC4Q9NPP4 1024 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 RBAKQ9NYW8 714 aaPredicted RBP19.03■□□□□ 0.64
KRT28-201ENST00000306658 GTF2IRD1Q9UHL9 959 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 PLAGL2Q9UPG8 496 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 DAAM1Q9Y4D1 1078 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 CNTNAP2Q9UHC6 1331 aa19.03■□□□□ 0.64
KRT28-201ENST00000306658 TRIP12Q14669 1992 aaPredicted RBP19.03■□□□□ 0.64
KRT28-201ENST00000306658 GPR32O75388 356 aa19.02■□□□□ 0.64
KRT28-201ENST00000306658 DLATP10515 647 aaKnown RBP19.02■□□□□ 0.64
KRT28-201ENST00000306658 HARSP12081 509 aaKnown RBP19.02■□□□□ 0.64
KRT28-201ENST00000306658 UCHL3P15374 230 aa19.02■□□□□ 0.64
KRT28-201ENST00000306658 HNRNPH3P31942 346 aaKnown RBP19.02■□□□□ 0.64
KRT28-201ENST00000306658 ZNF200P98182 395 aaPredicted RBP19.02■□□□□ 0.64
KRT28-201ENST00000306658 NCBP1Q09161 790 aaKnown RBP19.02■□□□□ 0.64
KRT28-201ENST00000306658 MEA1Q16626 185 aa19.02■□□□□ 0.64
KRT28-201ENST00000306658 AMHR2Q16671 573 aa19.02■□□□□ 0.64
KRT28-201ENST00000306658 ZNF568Q3ZCX4 644 aa19.02■□□□□ 0.64
KRT28-201ENST00000306658 KRT39Q6A163 491 aa19.02■□□□□ 0.64
KRT28-201ENST00000306658 CCSAPQ6IQ19 270 aaPredicted RBP19.02■□□□□ 0.64
KRT28-201ENST00000306658 EHBP1Q8NDI1 1231 aa19.02■□□□□ 0.64
KRT28-201ENST00000306658 BAP1Q92560 729 aa19.02■□□□□ 0.64
KRT28-201ENST00000306658 TMEM117Q9H0C3 514 aa19.02■□□□□ 0.64
KRT28-201ENST00000306658 TMEM8AQ9HCN3 771 aa19.02■□□□□ 0.64
KRT28-201ENST00000306658 KCND1Q9NSA2 647 aa19.02■□□□□ 0.64
KRT28-201ENST00000306658 ABLIM1O14639 778 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 CCP110O43303 1012 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 CSDE1O75534 798 aaKnown RBP19.01■□□□□ 0.63
KRT28-201ENST00000306658 CABYRO75952 493 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 ACTN1P12814 892 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 HSPA6P17066 643 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 CLDN10P78369 228 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 CDK17Q00537 523 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 TMEM62Q0P6H9 643 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 PDXDC1Q6P996 788 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 SYN2Q92777 582 aaPredicted RBP19.01■□□□□ 0.63
KRT28-201ENST00000306658 INTS2Q9H0H0 1204 aaKnown RBP19.01■□□□□ 0.63
KRT28-201ENST00000306658 TSKSQ9UJT2 592 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 GINS2Q9Y248 185 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 SOWAHDA6NJG2 315 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 LRRC53A6NM62 1247 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 RPLP2P05387 115 aaKnown RBP19.01■□□□□ 0.63
KRT28-201ENST00000306658 FAM47CQ5HY64 1035 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 DPY19L2P1Q6NXN4 242 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 WDR59Q6PJI9 974 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms